RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 HYLS1Q96M11 299 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 DCLRE1CQ96SD1 692 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 MAPKAP1Q9BPZ7 522 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 C12orf4Q9NQ89 552 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 TRIOBPQ9H2D6 2365 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SCN2BO60939 215 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 TSPAN9O75954 239 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 STC2O76061 302 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SLC22A5O76082 557 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 TPPPO94811 219 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CDRT1O95170 752 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 PRPS1L1P21108 318 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 BMP8BP34820 402 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SLC9A3P48764 834 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 RRAS2P62070 204 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 IKZF1Q13422 519 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 PTGES3Q15185 160 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 SPHARQ15513 63 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 EXOC3L2Q2M3D2 409 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 DDI2Q5TDH0 399 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 PXDC1Q5TGL8 231 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 PTRHD1Q6GMV3 140 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 TOR1AIP2Q8NFQ8 470 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 SPPL2AQ8TCT8 520 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 C2orf15Q8WU43 125 aaKnown RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 SELENOMQ8WWX9 145 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 EXOC2Q96KP1 924 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 MAGEB10Q96LZ2 347 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 SMIM14Q96QK8 99 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 NDUFB11Q9NX14 153 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 TRPM5Q9NZQ8 1165 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 PLEKHB1Q9UF11 243 aaPredicted RBP11.38□□□□□ -0.59
LTBR-203ENST00000441074 VPS4AQ9UN37 437 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 INSL5Q9Y5Q6 135 aa11.38□□□□□ -0.59
LTBR-203ENST00000441074 H3BNC9 293 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 PLD2O14939 933 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CSO75390 466 aaKnown RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 CXCL14O95715 111 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 F11P03951 625 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 RHOCP08134 193 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 ACPPP15309 386 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 ZNF7P17097 686 aaPredicted RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 ETV3P41162 512 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 WNT3P56703 355 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CLDN20P56880 219 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 SELENOWP63302 87 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 POU6F2P78424 691 aaPredicted RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 SPIBQ01892 262 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 MRPL28Q13084 256 aaKnown RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 RAB33AQ14088 237 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 ANGPT1Q15389 498 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CPSF6Q16630 551 aaKnown RBP eCLIP11.37□□□□□ -0.59
LTBR-203ENST00000441074 MEDAGQ5VYS4 303 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 GAREM2Q75VX8 874 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 TDHQ8IZJ6 230 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 C9orf62Q8N4C0 152 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 OR8H1Q8NGG4 311 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 APOL5Q9BWW9 433 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CHST8Q9H2A9 424 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 SLC25A19Q9HC21 320 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 BPIFA1Q9NP55 256 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 ELF5Q9UKW6 265 aaPredicted RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 POLHQ9Y253 713 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 FNDC3AQ9Y2H6 1198 aaKnown RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 PCDHB11Q9Y5F2 797 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 ZAR1LA6NP61 321 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 WASHC1A8K0Z3 465 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 NPIPB8E9PQR5 432 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 BET1O15155 118 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 LILRB3O75022 631 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 SLC43A1O75387 559 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CKMT1AP12532 417 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 DGKAP23743 735 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 PCGF2P35227 344 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 CDH12P55289 794 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 HNRNPA0Q13151 305 aaKnown RBP11.37□□□□□ -0.59
LTBR-203ENST00000441074 NCF4Q15080 339 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 PLPP4Q5VZY2 271 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 KCTD20Q7Z5Y7 419 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 BBS7Q8IWZ6 715 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 FAM217AQ8IXS0 508 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 C19orf18Q8NEA5 215 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 C19orf43Q9BQ61 176 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 TCF25Q9BQ70 676 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 TPT1P8Q9HAU6 139 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 FZD3Q9NPG1 666 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
LTBR-203ENST00000441074 FAM120CQ9NX05 1096 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms