RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF354BQ96LW1 612 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 TMEM237Q96Q45 408 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 FRG2BQ96QU4 278 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 ZNF717Q9BY31 904 aaPredicted RBP22.13■■□□□ 1.13
VARS-217ENST00000440048 STMN3Q9NZ72 180 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 MAP10Q9P2G4 905 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 FBXW2Q9UKT8 454 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 PPT2Q9UMR5 302 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 SPACA6W5XKT8 324 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 RELNP78509 3460 aa22.13■■□□□ 1.13
VARS-217ENST00000440048 COL12A1Q99715 3063 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 ESPL1Q14674 2120 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 SUPT7LO94864 414 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 IMPDH1P20839 514 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 PPP2R1BP30154 601 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 PRKAA2P54646 552 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 IFT88Q13099 833 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 ACER2Q5QJU3 275 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 CRLF3Q8IUI8 442 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 SLC22A9Q8IVM8 553 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 ZCCHC7Q8N3Z6 543 aaKnown RBP22.12■■□□□ 1.13
VARS-217ENST00000440048 KIF2BQ8N4N8 673 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 C19orf60Q96EN9 201 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 SERPINI1Q99574 410 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 NPAS2Q99743 824 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 RNF32Q9H0A6 362 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 PNO1Q9NRX1 252 aaKnown RBP22.12■■□□□ 1.13
VARS-217ENST00000440048 ZNF225Q9UK10 706 aa22.12■■□□□ 1.13
VARS-217ENST00000440048 EEDO75530 441 aaKnown RBP22.11■■□□□ 1.13
VARS-217ENST00000440048 NUDT17P0C025 328 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 CPN2P22792 545 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 BSGP35613 385 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 TNFSF10P50591 281 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 ERCC6LQ2NKX8 1250 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 C10orf62Q5T681 223 aaPredicted RBP22.11■■□□□ 1.13
VARS-217ENST00000440048 EMBQ6PCB8 327 aa22.11■■□□□ 1.13
VARS-217ENST00000440048 USP9XQ93008 2570 aaPredicted RBP22.11■■□□□ 1.13
VARS-217ENST00000440048 MYOCOSA0A1B0GUC4 107 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 TLDC2A0PJX2 215 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 MYO1DO94832 1006 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 PROCP04070 461 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 CRHR1P34998 444 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 TAS2R50P59544 299 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 TERF2Q15554 542 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 MEP1AQ16819 746 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 SGO1Q5FBB7 561 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 GPR180Q86V85 440 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 BEST3Q8N1M1 668 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 SLC5A8Q8N695 610 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 GALNT11Q8NCW6 608 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 MYRIPQ8NFW9 859 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 OR1N1Q8NGS0 311 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 CAVIN3Q969G5 261 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 L3HYPDHQ96EM0 354 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 ELOVL6Q9H5J4 265 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 DDX31Q9H8H2 851 aaKnown RBP22.1■■□□□ 1.13
VARS-217ENST00000440048 ADAP2Q9NPF8 381 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 ASF1BQ9NVP2 202 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 TRPS1Q9UHF7 1281 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 NTNG1Q9Y2I2 539 aa22.1■■□□□ 1.13
VARS-217ENST00000440048 COPG1Q9Y678 874 aaKnown RBP22.1■■□□□ 1.13
VARS-217ENST00000440048 A0A0A6YYD5 115 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 BLACEA4D250 179 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 SYNDIG1LA6NDD5 238 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 OR5H15A6NDH6 313 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 G3V2L1 256 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 MAN1A2O60476 641 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 LDB3O75112 727 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 VPS4BO75351 444 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 OR4F21O95013 312 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 SEMA3DO95025 777 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 CCT5P48643 541 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 HNRNPH2P55795 449 aaKnown RBP22.09■■□□□ 1.13
VARS-217ENST00000440048 STX4Q12846 297 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 FAM219BQ5XKK7 198 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 MRM1Q6IN84 353 aaKnown RBP22.09■■□□□ 1.13
VARS-217ENST00000440048 ZYG11AQ6WRX3 759 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 B3GNT7Q8NFL0 401 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 ANKRD9Q96BM1 317 aaPredicted RBP22.09■■□□□ 1.13
VARS-217ENST00000440048 ZNF382Q96SR6 550 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 ALOXE3Q9BYJ1 711 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.09■■□□□ 1.13
VARS-217ENST00000440048 FARSBQ9NSD9 589 aaKnown RBP22.09■■□□□ 1.13
VARS-217ENST00000440048 MS4A12Q9NXJ0 267 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 PHF11Q9UIL8 331 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 GRID1Q9ULK0 1009 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 VPS4AQ9UN37 437 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 ATG4BQ9Y4P1 393 aa22.09■■□□□ 1.13
VARS-217ENST00000440048 SPTBN1Q01082 2364 aaKnown RBP22.08■■□□□ 1.13
VARS-217ENST00000440048 TRAV17A0A0B4J275 112 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 TMPRSS11DO60235 418 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 MYL2P10916 166 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 KRT4P19013 534 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 TNFRSF17Q02223 184 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 ID2Q02363 134 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 SLC18A2Q05940 514 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 ELAVL1Q15717 326 aaKnown RBP22.08■■□□□ 1.13
VARS-217ENST00000440048 CCDC153Q494R4 210 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 C18orf63Q68DL7 685 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 C4orf33Q8N1A6 199 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms