RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
HSPG2-206ENST00000439717 MASP2O00187 686 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 PROM1O43490 865 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 EEDO75530 441 aaKnown RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 CRCPO75575 148 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 ZWINTO95229 277 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 BPGMP07738 259 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 PRR35P0CG20 571 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 UROSP10746 265 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 MAOAP21397 527 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 CPN2P22792 545 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TLX1P31314 330 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 BUD31P41223 144 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 Q0VFX4 171 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 SLC13A2Q13183 592 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 BIKQ13323 160 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TCHHL1Q5QJ38 904 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 PLAG1Q6DJT9 500 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 PAPD4Q6PIY7 484 aaKnown RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 ASB18Q6ZVZ8 466 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TMEM52Q8NDY8 209 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 M1APQ8TC57 530 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TANKQ92844 425 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 THOC3Q96J01 351 aaKnown RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 PKNOX2Q96KN3 472 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 KCNA7Q96RP8 456 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 CSF3RQ99062 836 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 WDR77Q9BQA1 342 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 MECRQ9BV79 373 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 MRPL1Q9BYD6 325 aaKnown RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF552Q9H707 407 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 EML4Q9HC35 981 aaKnown RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 ZNF71Q9NQZ8 489 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-206ENST00000439717 VPS29Q9UBQ0 182 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 ASB4Q9Y574 426 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 TIMM22Q9Y584 194 aa11.09□□□□□ -0.63
HSPG2-206ENST00000439717 CACNA1GO43497 2377 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 IGHV3-20A0A0C4DH32 117 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 ARHGAP10A1A4S6 786 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 BIRC5O15392 142 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TMPRSS11DO60235 418 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 DPM1O60762 260 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 GUCY1B2O75343 617 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-206ENST00000439717 KLK1P06870 262 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-206ENST00000439717 PPP2R1BP30154 601 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 SERPINB4P48594 390 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 HNRNPFP52597 415 aaKnown RBP11.08□□□□□ -0.64
HSPG2-206ENST00000439717 FOXA1P55317 472 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TNFRSF17Q02223 184 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TBL3Q12788 808 aaKnown RBP11.08□□□□□ -0.64
HSPG2-206ENST00000439717 STX4Q12846 297 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 RAPSNQ13702 412 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 SERTAD2Q14140 314 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TERF2Q15554 542 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 CCNYL2Q5T2Q4 361 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 AGAP7PQ5VUJ5 663 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 IGFL3Q6UXB1 125 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 COMMD6Q7Z4G1 85 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TRIM46Q7Z4K8 759 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 CUZD1Q86UP6 607 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 NUDCD3Q8IVD9 361 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 OR6Y1Q8NGX8 325 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 CHTF18Q8WVB6 975 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 TM9SF4Q92544 642 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 AGAP4Q96P64 663 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 ACPTQ9BZG2 426 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 RPF2Q9H7B2 306 aaKnown RBP11.08□□□□□ -0.64
HSPG2-206ENST00000439717 WDR41Q9HAD4 459 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 MMP25Q9NPA2 562 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 KCNK9Q9NPC2 374 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 ATG4BQ9Y4P1 393 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
HSPG2-206ENST00000439717 BSNQ9UPA5 3926 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 K7EM74 188 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 AZIN1O14977 448 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 C1QL1O75973 258 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 PDGFAP04085 211 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 FGF4P08620 206 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 DHRS4L1P0CG22 281 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 NR2F6P10588 404 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 TPP2P29144 1249 aaPredicted RBP11.07□□□□□ -0.64
HSPG2-206ENST00000439717 HTR6P50406 440 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SLC18A1P54219 525 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 HNRNPH2P55795 449 aaKnown RBP11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SLC26A5P58743 744 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 TRA2BP62995 288 aaKnown RBP11.07□□□□□ -0.64
HSPG2-206ENST00000439717 C19orf57Q0VDD7 668 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 NFATC3Q12968 1075 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 BTBD16Q32M84 506 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SPIN4Q56A73 249 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 CRB2Q5IJ48 1285 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 IGFL2Q6UWQ7 119 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms