RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 PPP6CO00743 305 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 DLX3O60479 287 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 GSTA1P08263 222 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 HERVK_113P63132 956 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 MRPL49Q13405 166 aaKnown RBP19.15■□□□□ 0.66
UBE2F-212ENST00000439338 CUL3Q13618 768 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 TERF2Q15554 542 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 UNC50Q53HI1 259 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 FAM219BQ5XKK7 198 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 FRG2Q64ET8 278 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 TTC19Q6DKK2 380 aaPredicted RBP19.15■□□□□ 0.66
UBE2F-212ENST00000439338 TDRPQ86YL5 185 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 ZCCHC7Q8N3Z6 543 aaKnown RBP19.15■□□□□ 0.66
UBE2F-212ENST00000439338 GRHL3Q8TE85 626 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 TMEM237Q96Q45 408 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 FRG2BQ96QU4 278 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 ERVK-6Q9BXR3 956 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 CDCP1Q9H5V8 836 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 ADAP2Q9NPF8 381 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 PSD3Q9NYI0 1048 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 ABI3Q9P2A4 366 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 SVILO95425 2214 aa19.15■□□□□ 0.66
UBE2F-212ENST00000439338 GABRR3A8MPY1 467 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 LDB3O75112 727 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 EEDO75530 441 aaKnown RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 SLU7O95391 586 aaKnown RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 OTCP00480 354 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 IFNA16P05015 189 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 ATP5F1P24539 256 aaPredicted RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 BSGP35613 385 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 HSD17B3P37058 310 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 ARFIP1P53367 373 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 HNRNPH2P55795 449 aaKnown RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 ID2Q02363 134 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 CLCQ05315 142 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 STX4Q12846 297 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 IFT88Q13099 833 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 ZNF678Q5SXM1 525 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 RPUSD3Q6P087 351 aaKnown RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 LETMD1Q6P1Q0 360 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 LGI4Q8N135 537 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 APCDD1LQ8NCL9 501 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 B3GNT7Q8NFL0 401 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 TRPC4APQ8TEL6 797 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 SERPINI1Q99574 410 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 BARD1Q99728 777 aaKnown RBP19.14■□□□□ 0.65
UBE2F-212ENST00000439338 ALOXE3Q9BYJ1 711 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 PPCSQ9HAB8 311 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 AGPAT4Q9NRZ5 378 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 DCDC2Q9UHG0 476 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 PPT2Q9UMR5 302 aa19.14■□□□□ 0.65
UBE2F-212ENST00000439338 A0A0A6YYD5 115 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 TRBV11-1A0A0K0K1C0 115 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 BLACEA4D250 179 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 SYNDIG1LA6NDD5 238 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 PRAMEF2O60811 474 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 GLRA3O75311 464 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 SUPT7LO94864 414 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 KRT15P19012 456 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 TNFRSF17Q02223 184 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 SRSF1Q07955 248 aaKnown RBP eCLIP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 TUBA3CQ13748 450 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 ELAVL1Q15717 326 aaKnown RBP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 SGO1Q5FBB7 561 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 TUBA3EQ6PEY2 450 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 GPR180Q86V85 440 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 RPS19BP1Q86WX3 136 aaKnown RBP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 SUN3Q8TAQ9 357 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 NCLNQ969V3 563 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 VMP1Q96GC9 406 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 UTP23Q9BRU9 249 aaKnown RBP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 DEFB126Q9BYW3 111 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 ELOVL6Q9H5J4 265 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 ANKRD10Q9NXR5 420 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 TRPS1Q9UHF7 1281 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 PHF11Q9UIL8 331 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 ZNF223Q9UK11 482 aaPredicted RBP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 EMCNQ9ULC0 261 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 V9GYY5 206 aaPredicted RBP19.13■□□□□ 0.65
UBE2F-212ENST00000439338 DOPEY2Q9Y3R5 2298 aa19.13■□□□□ 0.65
UBE2F-212ENST00000439338 LRRK2Q5S007 2527 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 TMPRSS11DO60235 418 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 PRKRAO75569 313 aaKnown RBP19.12■□□□□ 0.65
UBE2F-212ENST00000439338 OR4F21O95013 312 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 SEMA3DO95025 777 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 CLCN2P51788 898 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 PRKAA2P54646 552 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 SERTAD2Q14140 314 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 C10orf62Q5T681 223 aaPredicted RBP19.12■□□□□ 0.65
UBE2F-212ENST00000439338 C18orf63Q68DL7 685 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 CYP20A1Q6UW02 462 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 FAM180AQ6UWF9 173 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 SH2D5Q6ZV89 423 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 NUDT13Q86X67 352 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 SLC22A9Q8IVM8 553 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 TMEM132CQ8N3T6 1108 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 OR2W6PQ8NHA6 318 aa19.12■□□□□ 0.65
UBE2F-212ENST00000439338 ANKRD9Q96BM1 317 aaPredicted RBP19.12■□□□□ 0.65
UBE2F-212ENST00000439338 SIGLEC12Q96PQ1 595 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms