RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TRIM46Q7Z4K8 759 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 CLYBLQ8N0X4 340 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 ZNF781Q8N8C0 355 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 OR11G2Q8NGC1 345 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 APIPQ96GX9 242 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 C20orf27Q9GZN8 174 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 PRDM9Q9NQV7 894 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 C19orf25Q9UFG5 118 aaPredicted RBP15.9■□□□□ 0.14
TARDBP-203ENST00000439080 ZDHHC2Q9UIJ5 367 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 MMACHCQ9Y4U1 282 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 BSNQ9UPA5 3926 aa15.9■□□□□ 0.14
TARDBP-203ENST00000439080 LOC102723996A0A087X1L8 192 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 A0A1W2PQ72 361 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 PRKRAO75569 313 aaKnown RBP15.89■□□□□ 0.13
TARDBP-203ENST00000439080 RSL1D1O76021 490 aaKnown RBP15.89■□□□□ 0.13
TARDBP-203ENST00000439080 FAM58BPP0C7Q3 252 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 BUD31P41223 144 aaPredicted RBP15.89■□□□□ 0.13
TARDBP-203ENST00000439080 RRADP55042 308 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 PPP2R2AP63151 447 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ACSM2AQ08AH3 577 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 STX3Q13277 289 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 NSDHLQ15738 373 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 DCAF10Q5QP82 559 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 CCNYL2Q5T2Q4 361 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ACSM2BQ68CK6 577 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ANKRD37Q7Z713 158 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 GPR180Q86V85 440 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 SCUBE1Q8IWY4 988 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 DDIASQ8IXT1 998 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ZNF595Q8IYB9 648 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 PLPP5Q8NEB5 264 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 RAB3IL1Q8TBN0 382 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 CHTF18Q8WVB6 975 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 APOBEC4Q8WW27 367 aaKnown RBP15.89■□□□□ 0.13
TARDBP-203ENST00000439080 TTC9Q92623 222 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 VPS50Q96JG6 964 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 FER1L6-AS2Q96M78 137 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 PTCHD1Q96NR3 888 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 SORT1Q99523 831 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 TUBB1Q9H4B7 451 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 PRTFDC1Q9NRG1 225 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 MS4A12Q9NXJ0 267 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ATG4BQ9Y4P1 393 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 ASB4Q9Y574 426 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 DOCK10Q96BY6 2186 aa15.89■□□□□ 0.13
TARDBP-203ENST00000439080 IGKV3D-11A0A0A0MRZ8 115 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 IGHV1-45A0A0A0MS14 117 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 MASP2O00187 686 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 PIP5K1BO14986 540 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 PCDH7O60245 1069 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 SKAP2O75563 359 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-203ENST00000439080 DNAJB5O75953 348 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 SNUPNO95149 360 aaKnown RBP15.88■□□□□ 0.13
TARDBP-203ENST00000439080 AIFM1O95831 613 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 NR2F6P10588 404 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 MAPK12P53778 367 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 HSD17B7P56937 341 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 BTKQ06187 659 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 SLC13A2Q13183 592 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 UGT3A2Q3SY77 523 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 SPDYAQ5MJ70 313 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 C18orf63Q68DL7 685 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 CLNKQ7Z7G1 428 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 APLFQ8IW19 511 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-203ENST00000439080 TRIM42Q8IWZ5 723 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 HOMEZQ8IX15 550 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 TMEM102Q8N9M5 508 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-203ENST00000439080 OR2T11Q8NH01 316 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 EBPLQ9BY08 206 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 TRIM55Q9BYV6 548 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 ING2Q9H160 280 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 NECTIN3Q9NQS3 549 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 TEX10Q9NXF1 929 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-203ENST00000439080 RAP2CQ9Y3L5 183 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 CCL27Q9Y4X3 112 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 CPAMD8Q8IZJ3 1885 aa15.88■□□□□ 0.13
TARDBP-203ENST00000439080 NSG1A0A0A6YYJ2 146 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 IGHV3-20A0A0C4DH32 117 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 A0A1W2PR48 441 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 TCRBV16S1A1N1A0A5B0 115 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 BLACEA4D250 179 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 TGFBR3LH3BV60 316 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 ERVH48-1M5A8F1 160 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 SLC28A1O00337 649 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 CLDN4O14493 209 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 PROM1O43490 865 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 RGS14O43566 566 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 HPP00738 406 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 LINC00032P0C843 101 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 NR1D1P20393 614 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 TIA1P31483 386 aaKnown RBP eCLIP15.87■□□□□ 0.131e-8■■□□□ 14.3
TARDBP-203ENST00000439080 POLE2P56282 527 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 RAE1P78406 368 aaKnown RBP15.87■□□□□ 0.13
TARDBP-203ENST00000439080 PCOLCEQ15113 449 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 NR6A1Q15406 480 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 ATG16L1Q676U5 607 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 CPEB2Q7Z5Q1 589 aaKnown RBP15.87■□□□□ 0.13
TARDBP-203ENST00000439080 CLEC1AQ8NC01 280 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 ARHGAP9Q9BRR9 750 aa15.87■□□□□ 0.13
TARDBP-203ENST00000439080 ILKAPQ9H0C8 392 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms