RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 PHEXP78562 749 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 PRDX1Q06830 199 aaKnown RBP13.95□□□□□ -0.18
RFTN1-203ENST00000432519 NPRL3Q12980 569 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 ZNF776Q68DI1 518 aaPredicted RBP13.95□□□□□ -0.18
RFTN1-203ENST00000432519 TBC1D3GQ6DHY5 549 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 TBC1D3CQ6IPX1 549 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 TBC1D3Q8IZP1 549 aaPredicted RBP13.95□□□□□ -0.18
RFTN1-203ENST00000432519 APH1BQ8WW43 257 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 FKBP10Q96AY3 582 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 MTERF3Q96E29 417 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 SERHL2Q9H4I8 314 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 PHPT1Q9NRX4 125 aaPredicted RBP13.95□□□□□ -0.18
RFTN1-203ENST00000432519 ICKQ9UPZ9 632 aa13.95□□□□□ -0.18
RFTN1-203ENST00000432519 PRR19A6NJB7 356 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 M0R129 80 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 TNFRSF11BO00300 401 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PCDH17O14917 1159 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 CAPN5O15484 640 aaPredicted RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 SEMA7AO75326 666 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 EGFP01133 1207 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ARAFP10398 606 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 POU2F1P14859 743 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 BCL6P41182 706 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ENTPD1P49961 510 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 BNIP3Q12983 259 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 EXOC3L2Q2M3D2 409 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ZNF750Q32MQ0 723 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ATAT1Q5SQI0 421 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 TRIM40Q6P9F5 258 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 IKBIPQ70UQ0 350 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 HMGN2P46Q86SG4 172 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 CCL4L1Q8NHW4 92 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 SLC38A5Q8WUX1 472 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ZNF300Q96RE9 604 aaPredicted RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 EPYCQ99645 322 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 SLC6A20Q9NP91 592 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ACSL5Q9ULC5 683 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 SLC17A4Q9Y2C5 497 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 NAALAD2Q9Y3Q0 740 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PRAMEF27A3QJZ7 478 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 TRIM64BA6NI03 449 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PLRG1O43660 514 aaKnown RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 UGT2B11O75310 529 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 RPN2P04844 631 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 MASP1P48740 699 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 RAB28P51157 221 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 MLLT10P55197 1068 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PCBP4P57723 403 aaKnown RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 DMPKQ09013 629 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 GRSF1Q12849 480 aaKnown RBP eCLIP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 HYAL2Q12891 473 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 FADDQ13158 208 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 AQP6Q13520 282 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 KEAP1Q14145 624 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 KIAA1614Q5VZ46 1190 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 NLGN4XQ8N0W4 816 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 OR4C15Q8NGM1 316 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ZNF420Q8TAQ5 688 aaPredicted RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 POP5Q969H6 163 aaKnown RBP13.94□□□□□ -0.18
RFTN1-203ENST00000432519 FCRL4Q96PJ5 515 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 S1PR5Q9H228 398 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PCDHGB3Q9Y5G1 929 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 PCDHGA6Q9Y5G7 932 aa13.94□□□□□ -0.18
RFTN1-203ENST00000432519 ARHGEF17Q96PE2 2063 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 E9PQ18 207 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 NME6O75414 186 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 SEMA3DO95025 777 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 BCHEP06276 602 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 HOXB6P17509 224 aaKnown RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 AK4P27144 223 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 KRT20P35900 424 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 DSTNP60981 165 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 SLC35A2P78381 396 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 SPIBQ01892 262 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 LRRC74AQ0VAA2 488 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 MAD2L1BPQ15013 274 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 IFI44LQ53G44 452 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 SLC16A12Q6ZSM3 486 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 ENTHD1Q8IYW4 607 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 FAR1Q8WVX9 515 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 MUL1Q969V5 352 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 MRPL38Q96DV4 380 aaKnown RBP13.93□□□□□ -0.18
RFTN1-203ENST00000432519 NRBF2Q96F24 287 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 PDXPQ96GD0 296 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 TUBA1CQ9BQE3 449 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 APOOQ9BUR5 198 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 FUNDC2Q9BWH2 189 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 SLC28A3Q9HAS3 691 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 AMBNQ9NP70 447 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 PCDHGA10Q9Y5H3 936 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 TRBV23OR9-2A0A075B6M9 112 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 LRIT2A6NDA9 550 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 HAT1O14929 419 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 PDPK1O15530 556 aa13.93□□□□□ -0.18
RFTN1-203ENST00000432519 CCDC159P0C7I6 412 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms