RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 UQCRC1P31930 480 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 DGKQP52824 942 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 SLBPQ14493 270 aaKnown RBP eCLIP16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 SLC10A1Q14973 349 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 SPANXN3Q5MJ09 141 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 FAM45BPQ6NSW5 357 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 TMIGD1Q6UXZ0 262 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 ZNF321PQ8N8H1 164 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 GOLM1Q8NBJ4 401 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 TTLQ8NG68 377 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 GOT1L1Q8NHS2 421 aaPredicted RBP16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 SGCZQ96LD1 299 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 CSF3RQ99062 836 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 RASSF1Q9NS23 344 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 TUBA8Q9NY65 449 aaPredicted RBP16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 CRIM1Q9NZV1 1036 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 JMJD1CQ15652 2540 aa16.94■□□□□ 0.3
UPK3BP1-201ENST00000428678 TRGV5A0A0B4J1U4 118 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 LRIT2A6NDA9 550 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 NPEPPSL1A6NEC2 478 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 GOLGA6L6A8MZA4 724 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CDC7O00311 574 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 PROM1O43490 865 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 WDR47O94967 919 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 C1GALT1C1LP0DN25 315 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CCL3P10147 92 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 GNAZP19086 355 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 TNNI3P19429 210 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CERS1P27544 350 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 FOXO1Q12778 655 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 STX4Q12846 297 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 RIPPLY2Q5TAB7 128 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 OPN5Q6U736 354 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 MORN4Q8NDC4 146 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 OR14A16Q8NHC5 309 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 PTPMT1Q8WUK0 201 aaPredicted RBP16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CERS2Q96G23 380 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 MS4A14Q96JA4 679 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 QRFPRQ96P65 431 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 ALPK1Q96QP1 1244 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 ALOXE3Q9BYJ1 711 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 COPS7BQ9H9Q2 264 aaPredicted RBP16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 B4GALT7Q9UBV7 327 aa16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CORO1CQ9ULV4 474 aaPredicted RBP16.93■□□□□ 0.3
UPK3BP1-201ENST00000428678 CYR61O00622 381 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 CTNSO60931 367 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 GABRA1P14867 456 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 LIM2P55344 173 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 RNF4P78317 190 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 RCN2Q14257 317 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 HYAL4Q2M3T9 481 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 RNASEH2BQ5TBB1 312 aaKnown RBP16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 TRIM40Q6P9F5 258 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 SLCO4C1Q6ZQN7 724 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 GALNT7Q86SF2 657 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 CDC20BQ86Y33 519 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 KRT78Q8N1N4 520 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 OR2L5Q8NG80 312 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 OR5L2Q8NGL0 311 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 PDLIM5Q96HC4 596 aaKnown RBP16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 RUNDC3BQ96NL0 473 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 SERINC2Q96SA4 455 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 REXO4Q9GZR2 422 aaKnown RBP16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 SEMA4BQ9NPR2 832 aaPredicted RBP16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 DLL4Q9NR61 685 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 SPRR3Q9UBC9 169 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 VTI1BQ9UEU0 232 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 ATG4BQ9Y4P1 393 aa16.92■□□□□ 0.3
UPK3BP1-201ENST00000428678 ANKDD1BA6NHY2 528 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 A6NNC1 897 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 C17orf105B2RV13 164 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 HCN1O60741 890 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 ZNF354AO60765 605 aaPredicted RBP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 FOSL1P15407 271 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 ENDOUP21128 410 aaKnown RBP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 HPDP32754 393 aaPredicted RBP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 PIGAP37287 484 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 PEX19P40855 299 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 GDF5P43026 501 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 HNMTP50135 292 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 MTTPP55157 894 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 EFTUD2Q15029 972 aaKnown RBP eCLIP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 C18orf21Q32NC0 220 aaPredicted RBP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 MSS51Q4VC12 460 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 TEDDM1Q5T9Z0 273 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 FRA10AC1Q70Z53 315 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 OR8K3Q8NH51 312 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 SLC2A12Q8TD20 617 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 NAT9Q9BTE0 207 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 COPS7AQ9UBW8 275 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 DAPP1Q9UN19 280 aa16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.91■□□□□ 0.3
UPK3BP1-201ENST00000428678 NINQ8N4C6 2090 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 NCKAP5O14513 1909 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 FREM3P0C091 2139 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 CLEC3AO75596 197 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 ZNF37AP17032 561 aaPredicted RBP16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 GSTM2P28161 218 aa16.9■□□□□ 0.3
UPK3BP1-201ENST00000428678 ADAM8P78325 824 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms