RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
DDR1-235ENST00000428153 C18orf21Q32NC0 220 aaPredicted RBP16.16■□□□□ 0.18
DDR1-235ENST00000428153 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 SPNS3Q6ZMD2 512 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 ZBED8Q8IZ13 594 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 MARVELD2Q8N4S9 558 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 OR2M7Q8NG81 312 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 OR52N2Q8NGI0 321 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 OR5L2Q8NGL0 311 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 PTPMT1Q8WUK0 201 aaPredicted RBP16.16■□□□□ 0.18
DDR1-235ENST00000428153 UBE2E3Q969T4 207 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 GPR22Q99680 433 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 CPNE1Q99829 537 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 ALOXE3Q9BYJ1 711 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 DEPPQ9NTK1 212 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 TXNDC16Q9P2K2 825 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 PTBP2Q9UKA9 531 aaKnown RBP16.16■□□□□ 0.18
DDR1-235ENST00000428153 ZNF490Q9ULM2 529 aaPredicted RBP16.16■□□□□ 0.18
DDR1-235ENST00000428153 HRH3Q9Y5N1 445 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 SAR1BQ9Y6B6 198 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 SPACA6W5XKT8 324 aa16.16■□□□□ 0.18
DDR1-235ENST00000428153 NCF1BA6NI72 391 aaPredicted RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 NCF1CA8MVU1 366 aaPredicted RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 PRAMEF4O60810 478 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 IGHG3P01860 377 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 IFNA16P05015 189 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 NCF1P14598 390 aaPredicted RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 CD1DP15813 335 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 SERPINB1P30740 379 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 HK2P52789 917 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 PPIAP62937 165 aaKnown RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 TFF3Q07654 80 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 PCDH1Q08174 1060 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 DOC2AQ14183 400 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 ZKSCAN8Q15776 578 aaPredicted RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 HYAL4Q2M3T9 481 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 TMEM35AQ53FP2 167 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 XKR6Q5GH73 641 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 PRAMEF9Q5VWM5 478 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 OPN5Q6U736 354 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 RTL4Q6ZR62 310 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 LRRC70Q7Z2Q7 622 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 UBXN10Q96LJ8 280 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 CSF3RQ99062 836 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 FAM173AQ9BQD7 235 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
DDR1-235ENST00000428153 RNF6Q9Y252 685 aa16.15■□□□□ 0.18
DDR1-235ENST00000428153 A0A1B0GVC2 190 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 BCKDKO14874 412 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 GLSO94925 669 aaPredicted RBP16.14■□□□□ 0.17
DDR1-235ENST00000428153 OR6B1O95007 311 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 STMN1P16949 149 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 CD22P20273 847 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 CNR1P21554 472 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 SOX3P41225 446 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 HSPA7P48741 367 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 PLGLB1Q02325 96 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 IRF8Q02556 426 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 TBL3Q12788 808 aaKnown RBP16.14■□□□□ 0.17
DDR1-235ENST00000428153 MPEG1Q2M385 716 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 EMC4Q5J8M3 183 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 IL20RBQ6UXL0 311 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 CEP128Q6ZU80 1094 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 CLNKQ7Z7G1 428 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 CDH24Q86UP0 819 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 NUBPLQ8TB37 319 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 RBBP8Q99708 897 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 MS4A8Q9BY19 250 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 TTTY12Q9BZ98 90 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 TRIM31Q9BZY9 425 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 PHACTR1Q9C0D0 580 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 IL1RL2Q9HB29 575 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 KCNJ16Q9NPI9 418 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 SMYD2Q9NRG4 433 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 COPS7AQ9UBW8 275 aa16.14■□□□□ 0.17
DDR1-235ENST00000428153 MTO1Q9Y2Z2 717 aaKnown RBP16.14■□□□□ 0.17
DDR1-235ENST00000428153 HCFC1P51610 2035 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 FIGNL2A6NMB9 653 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 GSTA2P09210 222 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 EPORP19235 508 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 HIST1H1TP22492 207 aaPredicted RBP16.13■□□□□ 0.17
DDR1-235ENST00000428153 MSX1P28360 303 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 GP5P40197 560 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 RPL21P46778 160 aaKnown RBP16.13■□□□□ 0.17
DDR1-235ENST00000428153 ARFIP1P53367 373 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 KRTAP10-9P60411 292 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 RNF4P78317 190 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
DDR1-235ENST00000428153 GXYLT1Q4G148 440 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 CHSY3Q70JA7 882 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 LAS2Q8IYD9 372 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 FAM109AQ8N4B1 249 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 ACOT4Q8N9L9 421 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 SNX31Q8N9S9 440 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 STAG3L4Q8TBR4 150 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 SLC2A12Q8TD20 617 aa16.13■□□□□ 0.17
DDR1-235ENST00000428153 ZNF473Q8WTR7 871 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms