RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RCBTB1Q8NDN9 531 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ENKURQ8TC29 256 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ART5Q96L15 291 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 FRG2BQ96QU4 278 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 LGR4Q9BXB1 951 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 C8orf4Q9NR00 106 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PCDHGA2Q9Y5H1 932 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 EFCAB10A6NFE3 127 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 BCKDKO14874 412 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 KCNJ13O60928 360 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ATE1O95260 518 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CBSLP0DN79 551 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RAP2AP10114 183 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 IFI30P13284 250 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 MYF5P13349 255 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RNH1P13489 461 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ELK4P28324 431 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CBSP35520 551 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CCT3P49368 545 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ARSFP54793 590 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 OLR1P78380 273 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PIGFQ07326 219 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RANBP10Q6VN20 620 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RAB11FIP2Q7L804 512 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ISCA2Q86U28 154 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PACRGLQ8N7B6 248 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ZBED6CLQ96FA7 236 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CGREF1Q99674 301 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PRRG3Q9BZD7 231 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 IGSF5Q9NSI5 407 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 CCM2LQ9NUG4 571 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 ACTR10Q9NZ32 417 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 VPS29Q9UBQ0 182 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 PADI1Q9ULC6 663 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RUVBL1Q9Y265 456 aaKnown RBP10.2□□□□□ -0.78
TCOF1-204ENST00000427724 DHRS7Q9Y394 339 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 LYVE1Q9Y5Y7 322 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 RNF215Q9Y6U7 377 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 UNC13CQ8NB66 2214 aa10.2□□□□□ -0.78
TCOF1-204ENST00000427724 A8MV72 311 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 G6PDP11413 515 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 IGFBP5P24593 272 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 NFATC3Q12968 1075 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 HKDC1Q2TB90 917 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 C1QTNF12Q5T7M4 302 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ARHGAP12Q8IWW6 846 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TM9SF4Q92544 642 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF607Q96SK3 696 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RBM4BQ9BQ04 359 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RBM4Q9BWF3 364 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 SEC14L3Q9UDX4 400 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PHF11Q9UIL8 331 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CFL2Q9Y281 166 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TTC3P53804 2025 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 H3BMQ9 156 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 SOX1O00570 391 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CD1DP15813 335 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CAPN3P20807 821 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PRKACGP22612 351 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 EEFSECP57772 596 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RAB14P61106 215 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PDZK1Q5T2W1 519 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TNFAIP8L2Q6P589 184 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 KLHL17Q6TDP4 642 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 KLHL24Q6TFL4 600 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 DEF8Q6ZN54 512 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 LSMEM2Q8N112 164 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PJA1Q8NG27 643 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 VANGL1Q8TAA9 524 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 COG8Q96MW5 612 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 MUS81Q96NY9 551 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 MOV10Q9HCE1 1003 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CROCCQ5TZA2 2017 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 METTL12A8MUP2 240 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 LOC110117498-PIK3R3F6TDL0 507 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 hCG_2039718K7EN88 272 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CXCR6O00574 342 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PDPK1O15530 556 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 KLK10O43240 276 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PRKD3O94806 890 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PAPSS2O95340 614 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 HOXC8P31273 242 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CLCN7P51798 805 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 FOXA1P55317 472 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RPS13P62277 151 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CXorf57Q6NSI4 855 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 NANOGP8Q6NSW7 305 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CLEC14AQ86T13 490 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 HIPK1Q86Z02 1210 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF420Q8TAQ5 688 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 KIAA1191Q96A73 305 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 OSBPL10Q9BXB5 764 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 NAA50Q9GZZ1 169 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 NANOGQ9H9S0 305 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 SMURF2Q9HAU4 748 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 C1orf109Q9NX04 203 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms