RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 HERVK_113P63132 956 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 BIKQ13323 160 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 TUBA3CQ13748 450 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 NR6A1Q15406 480 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 FCRLBQ6BAA4 426 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 FAM180AQ6UWF9 173 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 TMEM132CQ8N3T6 1108 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 BCORP1Q8N888 145 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 ST6GALNAC3Q8NDV1 305 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 MYRIPQ8NFW9 859 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 GRHL3Q8TE85 626 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 NSUN5Q96P11 429 aaKnown RBP17.26■□□□□ 0.35
MSH5-207ENST00000425703 CDK15Q96Q40 435 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 SERPINI1Q99574 410 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 UTP23Q9BRU9 249 aaKnown RBP17.26■□□□□ 0.35
MSH5-207ENST00000425703 ERVK-6Q9BXR3 956 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 ZNF717Q9BY31 904 aaPredicted RBP17.26■□□□□ 0.35
MSH5-207ENST00000425703 DDX31Q9H8H2 851 aaKnown RBP17.26■□□□□ 0.35
MSH5-207ENST00000425703 TMEM216Q9P0N5 145 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 VTI1BQ9UEU0 232 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 DCDC2Q9UHG0 476 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 PHF11Q9UIL8 331 aa17.26■□□□□ 0.35
MSH5-207ENST00000425703 USP9XQ93008 2570 aaPredicted RBP17.26■□□□□ 0.35
MSH5-207ENST00000425703 CPAMD8Q8IZJ3 1885 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 SAP18O00422 153 aaKnown RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 SH3BGRLO75368 114 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 CPN2P22792 545 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 BSGP35613 385 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 ARL1P40616 181 aaPredicted RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 CLCN2P51788 898 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 STX4Q12846 297 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 SLAMF1Q13291 335 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 MILR1Q7Z6M3 343 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 GPR180Q86V85 440 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 SLC22A9Q8IVM8 553 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 RNF175Q8N4F7 328 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 KIF2BQ8N4N8 673 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 HORMAD2Q8N7B1 307 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 UBLCP1Q8WVY7 318 aaPredicted RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 DAZLQ92904 295 aaKnown RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 VMP1Q96GC9 406 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 SLX1AQ9BQ83 275 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 ALOXE3Q9BYJ1 711 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 DEFB126Q9BYW3 111 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 TRIM45Q9H8W5 580 aaPredicted RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 ANKZF1Q9H8Y5 726 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 SEMA4BQ9NPR2 832 aaPredicted RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 PNO1Q9NRX1 252 aaKnown RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 LYARQ9NX58 379 aaKnown RBP17.25■□□□□ 0.35
MSH5-207ENST00000425703 TBK1Q9UHD2 729 aa17.25■□□□□ 0.35
MSH5-207ENST00000425703 ANKUB1A6NFN9 424 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 GABRR3A8MPY1 467 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 A8MUA0 341 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 F10P00742 488 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 PYGBP11216 843 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 EDN3P14138 238 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 ATP5F1P24539 256 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 PPP2R1BP30154 601 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 TLX1P31314 330 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 TRHRP34981 398 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 CD96P40200 585 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 NEK2P51955 445 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 MLF1P58340 268 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 IGLV3-21P80748 117 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 SRSF1Q07955 248 aaKnown RBP eCLIP17.24■□□□□ 0.355e-12■■□□□ 12.5
MSH5-207ENST00000425703 IFT88Q13099 833 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 MRPL49Q13405 166 aaKnown RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 FHL5Q5TD97 284 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 ZNF324BQ6AW86 544 aaPredicted RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 MRM1Q6IN84 353 aaKnown RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 CLNKQ7Z7G1 428 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 NUDT13Q86X67 352 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 MORN4Q8NDC4 146 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 MDS2Q8NDY4 140 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 OR4F6Q8NGB9 312 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 OR14A16Q8NHC5 309 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 DNAJB8Q8NHS0 232 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 TANKQ92844 425 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 SORBS1Q9BX66 1292 aaKnown RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 CDCP1Q9H5V8 836 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 RPF2Q9H7B2 306 aaKnown RBP17.24■□□□□ 0.35
MSH5-207ENST00000425703 FBXW2Q9UKT8 454 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 CLCA3PQ9Y6N3 262 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 PTPN13Q12923 2485 aa17.24■□□□□ 0.35
MSH5-207ENST00000425703 A0A0A6YYD5 115 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 MAN1A2O60476 641 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 DLX3O60479 287 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 ETHE1O95571 254 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 CRYABP02511 175 aaKnown RBP17.23■□□□□ 0.35
MSH5-207ENST00000425703 IFNA16P05015 189 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 IMPDH1P20839 514 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 HSD17B3P37058 310 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 BUD31P41223 144 aaPredicted RBP17.23■□□□□ 0.35
MSH5-207ENST00000425703 PRKAA2P54646 552 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 TNFRSF17Q02223 184 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 CLCQ05315 142 aa17.23■□□□□ 0.35
MSH5-207ENST00000425703 ELOAQ14241 798 aaKnown RBP17.23■□□□□ 0.35
MSH5-207ENST00000425703 OR1C1Q15619 314 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms