RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 DCDC2Q9UHG0 476 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 EMCNQ9ULC0 261 aa16.74■□□□□ 0.27
IGHV3-47-201ENST00000425060 TRAV17A0A0B4J275 112 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 BLACEA4D250 179 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 TAC1P20366 129 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 ATP5F1P24539 256 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLCO1A2P46721 670 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLAMF1Q13291 335 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF678Q5SXM1 525 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 C10orf62Q5T681 223 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 FRG2Q64ET8 278 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 LETMD1Q6P1Q0 360 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 MILR1Q7Z6M3 343 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 CLNKQ7Z7G1 428 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 BEST3Q8N1M1 668 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 B3GNT7Q8NFL0 401 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 ANKRD9Q96BM1 317 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 MTFMTQ96DP5 389 aaKnown RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 FRG2BQ96QU4 278 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 PNO1Q9NRX1 252 aaKnown RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 VTI1BQ9UEU0 232 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF223Q9UK11 482 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 FBXW2Q9UKT8 454 aa16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 RP1L1Q8IWN7 2480 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-47-201ENST00000425060 A0A0A6YYD5 115 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 SYNDIG1LA6NDD5 238 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 EEDO75530 441 aaKnown RBP16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 MYO1DO94832 1006 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CBX6O95503 412 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 OTCP00480 354 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 UQCRHP07919 91 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 TSPAN8P19075 237 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 IMPDH1P20839 514 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CPN2P22792 545 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 RAP1GDS1P52306 607 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 PRKAA2P54646 552 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CLCQ05315 142 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 RPS19BP1Q86WX3 136 aaKnown RBP16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLC5A8Q8N695 610 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 EPS8L3Q8TE67 593 aaKnown RBP16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 GRHL3Q8TE85 626 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 TMEM237Q96Q45 408 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 SERPINI1Q99574 410 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CENPKQ9BS16 269 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 ALOXE3Q9BYJ1 711 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CDCP1Q9H5V8 836 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 ADAP2Q9NPF8 381 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 MS4A12Q9NXJ0 267 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 ATG4BQ9Y4P1 393 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 ASB4Q9Y574 426 aa16.72■□□□□ 0.27
IGHV3-47-201ENST00000425060 CDK2AP1O14519 115 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 PROM1O43490 865 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TMPRSS11DO60235 418 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 LDB3O75112 727 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 SUPT7LO94864 414 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 SEMA3DO95025 777 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLU7O95391 586 aaKnown RBP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 CD96P40200 585 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 MLF1P58340 268 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TAS2R50P59544 299 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TUBA3CQ13748 450 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 ELAVL1Q15717 326 aaKnown RBP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 FAM219BQ5XKK7 198 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 ZNF324BQ6AW86 544 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 WDR93Q6P2C0 686 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TUBA3EQ6PEY2 450 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 GPR180Q86V85 440 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TRPC4APQ8TEL6 797 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 AENQ8WTP8 325 aaKnown RBP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 PTPMT1Q8WUK0 201 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 L3HYPDHQ96EM0 354 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 TAAR6Q96RI8 345 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 SLC29A3Q9BZD2 475 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 PRM3Q9NNZ6 103 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 PCDHGB6Q9Y5F9 930 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 SPACA6W5XKT8 324 aa16.71■□□□□ 0.27
IGHV3-47-201ENST00000425060 ESPL1Q14674 2120 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 MYOCOSA0A1B0GUC4 107 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 G3V2L1 256 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 PRAMEF2O60811 474 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 CDH16O75309 829 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 GLRA3O75311 464 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 OR4F21O95013 312 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 NUDT17P0C025 328 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 ARL1P40616 181 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 ST13P50502 369 aaKnown RBP16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 CLCN2P51788 898 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 TNFRSF17Q02223 184 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 SLC18A2Q05940 514 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 IFT88Q13099 833 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 MRPL49Q13405 166 aaKnown RBP16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 SERTAD2Q14140 314 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 NR6A1Q15406 480 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 ZNF468Q5VIY5 522 aaPredicted RBP16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
IGHV3-47-201ENST00000425060 SLC22A9Q8IVM8 553 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms