RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 C11orf24Q96F05 449 aaPredicted RBP10.23□□□□□ -0.77
USP54-204ENST00000422491 GPR63Q9BZJ6 419 aa10.23□□□□□ -0.77
USP54-204ENST00000422491 ASB8Q9H765 288 aa10.23□□□□□ -0.77
USP54-204ENST00000422491 MALT1Q9UDY8 824 aa10.23□□□□□ -0.77
USP54-204ENST00000422491 RPL36Q9Y3U8 105 aaKnown RBP10.23□□□□□ -0.77
USP54-204ENST00000422491 INMT-MINDY4F8WBC2 141 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 SGK494L7N484 410 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RECKO95980 971 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CRATP43155 626 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 SLC6A12P48065 614 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CASP9P55211 416 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CAV3P56539 151 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 NFATC2Q13469 925 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CDH18Q13634 790 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RIN1Q13671 783 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CCSAPQ6IQ19 270 aaPredicted RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 METAP1DQ6UB28 335 aaPredicted RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 ZNF852Q6ZMS4 543 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 BCDIN3DQ7Z5W3 292 aaKnown RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 ADGRG2Q8IZP9 1017 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 GPRC5AQ8NFJ5 357 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CREB3L1Q96BA8 519 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TSSK6Q9BXA6 273 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 PIGUQ9H490 435 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RERGLQ9H628 205 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 ZFP64Q9NPA5 681 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 MRPL39Q9NYK5 338 aaKnown RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 COMMD3Q9UBI1 195 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 SF3B6Q9Y3B4 125 aaKnown RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 ZFP37Q9Y6Q3 630 aaPredicted RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 ENPP4Q9Y6X5 453 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TRPM7Q96QT4 1865 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TRBV5-4A0A0C4DH59 114 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RPS10-NUDT3A0A1W2PQS6 291 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CHP2O43745 196 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 FZD6O60353 706 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TPPPO94811 219 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 IGFBP1P08833 259 aaPredicted RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 CHRM5P08912 532 aaPredicted RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 ALPIP09923 528 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 HK1P19367 917 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 ACRV1P26436 265 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RBBP4Q09028 425 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 SCARB2Q14108 478 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 PLK5Q496M5 336 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CPTPQ5TA50 214 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 NCEH1Q6PIU2 408 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CEACAM20Q6UY09 585 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 USP30Q70CQ3 517 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 MOB2Q70IA6 237 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 CAMKMTQ7Z624 323 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 MRPL10Q7Z7H8 261 aaKnown RBP10.22□□□□□ -0.77
USP54-204ENST00000422491 TIGD4Q8IY51 512 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 SLC43A3Q8NBI5 491 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 NFKBIDQ8NI38 313 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 TINF2Q9BSI4 451 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 KCNN2Q9H2S1 579 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 RHCGQ9UBD6 479 aa10.22□□□□□ -0.77
USP54-204ENST00000422491 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 HEPACAM2A8MVW5 462 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 STK25O00506 426 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 LRRTM2O43300 516 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 HPGDSO60760 199 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 RAF1P04049 648 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 TPOP07202 933 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 OSMP13725 252 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 LHCGRP22888 699 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 EVX1P49640 407 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 RPS25P62851 125 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 PURAQ00577 322 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 EEF1A2Q05639 463 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 TWF1Q12792 350 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 FOXD4Q12950 439 aaPredicted RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 ILKQ13418 452 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 SNTA1Q13424 505 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 MPPE1Q53F39 396 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 KLHL22Q53GT1 634 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 TMEM107Q6UX40 140 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 TTC9BQ8N6N2 239 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 ZNF366Q8N895 744 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 PLA2G15Q8NCC3 412 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 LSM14AQ8ND56 463 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 FBXO32Q969P5 355 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 MSANTD3Q96H12 275 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 VPS29Q9UBQ0 182 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 ZNF282Q9UDV7 671 aaPredicted RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 KCND3Q9UK17 655 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 RABL2BQ9UNT1 228 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 RUVBL1Q9Y265 456 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 PCDHB9Q9Y5E1 797 aa10.21□□□□□ -0.77
USP54-204ENST00000422491 TDRD15B5MCY1 1934 aaKnown RBP10.21□□□□□ -0.77
USP54-204ENST00000422491 ISM1B1AKI9 464 aa10.21□□□□□ -0.78
USP54-204ENST00000422491 CBX4O00257 560 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms