RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 GAL3ST1Q99999 423 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 TSSK6Q9BXA6 273 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 PCDHGA2Q9Y5H1 932 aa13.22□□□□□ -0.29
SMARCA4-202ENST00000413806 FAAHO00519 579 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SLC6A6P31641 620 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 PITX1P78337 314 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SNX29P2Q8IUI4 249 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 DOHHQ9BU89 302 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 PAK1IP1Q9NWT1 392 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 GLS2Q9UI32 602 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SCDO00767 359 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 CYB5AP00167 134 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 EPCAMP16422 314 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 TUBG1P23258 451 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 UQCRC1P31930 480 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 MAP2K3P46734 347 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 APLP1P51693 650 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SNRPD2P62316 118 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF805Q5CZA5 627 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 UBQLNLQ8IYU4 475 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 ARNTL2Q8WYA1 636 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 PGAP3Q96FM1 320 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 ADAD1Q96M93 576 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 MUS81Q96NY9 551 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 CERS4Q9HA82 394 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 GALTP07902 379 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 GDI1P31150 447 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 CDKN2CP42773 168 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 NR4A2P43354 598 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 CDKN2DP55273 166 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 FGL2Q14314 439 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 PON3Q15166 354 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SCGB2B2Q4G0G5 96 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 SLC15A3Q8IY34 581 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 C3orf58Q8NDZ4 430 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 IFT52Q9Y366 437 aa13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-202ENST00000413806 GRID2O43424 1007 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC19A2O60779 497 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 JUPP14923 745 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 HRH2P25021 359 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 MAPK3P27361 379 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 TIA1P31483 386 aaKnown RBP eCLIP13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 GSTM4Q03013 218 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 CEACAM7Q14002 265 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 HAPLN2Q9GZV7 340 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 HSPE1-MOB4S4R3N1 261 aa13.21□□□□□ -0.3
SMARCA4-202ENST00000413806 ARHGEF15O94989 841 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SRCP12931 536 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PREPP48147 710 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 KCNAB2Q13303 367 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PMEPA1Q969W9 287 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 TMEM45AQ9NWC5 275 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 NUAK1O60285 661 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 VAMP2P63027 116 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 MAPK14Q16539 360 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 GID4Q8IVV7 300 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PIP5K1AQ99755 562 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 C13orf42A0A1B0GVH6 325 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SNAP29O95721 258 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 CLIC3O95833 236 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 NR2C1P13056 603 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 DECR1Q16698 335 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 EOGTQ5NDL2 527 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 C6orf141Q5SZD1 244 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 UBE2UQ5VVX9 321 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 LCN8Q6JVE9 175 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC22A15Q8IZD6 547 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 OR8K3Q8NH51 312 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 IRF7Q92985 503 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 KRBA1A5PL33 1030 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 C2orf74A8MZ97 194 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 MEN1O00255 615 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 MT-ND5P03915 603 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 BCKDHAP12694 445 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 HSD17B1P14061 328 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 FOXRED2Q8IWF2 684 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 YIPF7Q8N8F6 280 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 ASPNQ9BXN1 380 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms