RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ZNF525Q8N782 197 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 SNX31Q8N9S9 440 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 SMAP2Q8WU79 429 aaPredicted RBP6.38□□□□□ -1.39
UBE2F-204ENST00000409953 FAM168AQ92567 244 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 SGCDQ92629 289 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 PROX1Q92786 737 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 FBXW5Q969U6 566 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 UBXN10Q96LJ8 280 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 LINC00615Q96LM1 132 aaPredicted RBP6.38□□□□□ -1.39
UBE2F-204ENST00000409953 USP28Q96RU2 1077 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 RHOXF2Q9BQY4 288 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 TMEM204Q9BSN7 226 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 GRPEL1Q9HAV7 217 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBE2F-204ENST00000409953 TMEFF2Q9UIK5 374 aaPredicted RBP6.38□□□□□ -1.39
UBE2F-204ENST00000409953 PACSIN3Q9UKS6 424 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 JRKLQ9Y4A0 524 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 SACSQ9NZJ4 4579 aa6.38□□□□□ -1.39
UBE2F-204ENST00000409953 FAM181BA6NEQ2 426 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 LRRC14BA6NHZ5 514 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 AP3B1O00203 1094 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 EIF3FO00303 357 aaPredicted RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SMAD9O15198 467 aaKnown RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 FOXS1O43638 330 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 AHCYL1O43865 530 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 NRP2O60462 931 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 ZNF354AO60765 605 aaPredicted RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 HKR1P10072 659 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PDHA2P29803 388 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 UGT2B10P36537 528 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 HNF4AP41235 474 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 DNASE1L1P49184 302 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SSR4P51571 173 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 AIF1P55008 147 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 OR4D2P58180 307 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 BPIFB4P59827 614 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SNRPNP63162 240 aaKnown RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PCDH1Q08174 1060 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PTK6Q13882 451 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 DPYSQ14117 519 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 ABRAXAS2Q15018 415 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PDK1Q15118 436 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SF3B4Q15427 424 aaKnown RBP eCLIP6.37□□□□□ -1.393e-6■■■■■ 30.2
UBE2F-204ENST00000409953 NSDHLQ15738 373 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PRTGQ2VWP7 1150 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 CCDC40Q4G0X9 1142 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SH2D4BQ5SQS7 431 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 LIN54Q6MZP7 749 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 FAM151BQ6UXP7 276 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 DEF8Q6ZN54 512 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SPATC1Q76KD6 591 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 NT5DC3Q86UY8 548 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 ARMC10Q8N2F6 343 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 TRIML2Q8N7C3 387 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 TRIM58Q8NG06 486 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SLC30A5Q8TAD4 765 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 NEIL3Q8TAT5 605 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 MRAPQ8TCY5 172 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 C3orf49Q96BT1 292 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PAGE5Q96GU1 130 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 EAF1Q96JC9 268 aaPredicted RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SGCZQ96LD1 299 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 JMJD8Q96S16 334 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 ADGRE3Q9BY15 652 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 DEFB126Q9BYW3 111 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 VCX3BQ9H321 246 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 COG4Q9H9E3 785 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 LIN7BQ9HAP6 207 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 XAB2Q9HCS7 855 aaKnown RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 IL26Q9NPH9 171 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PLSCR4Q9NRQ2 329 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 PPP1R14DQ9NXH3 145 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 TUBA8Q9NY65 449 aaPredicted RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 IKZF3Q9UKT9 509 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 SOX13Q9UN79 622 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 RUVBL1Q9Y265 456 aaKnown RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 CAB39Q9Y376 341 aaPredicted RBP6.37□□□□□ -1.39
UBE2F-204ENST00000409953 FREM3P0C091 2139 aa6.37□□□□□ -1.39
UBE2F-204ENST00000409953 LRRC10BA6NIK2 292 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 GNB5O14775 395 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 PRPSAP2O60256 369 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 KDM1AO60341 852 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 S100A6P06703 90 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 COL6A2P12110 1019 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 CNR1P21554 472 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 GPD1P21695 349 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 PTPN6P29350 595 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 GBE1Q04446 702 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 CRYZQ08257 329 aaKnown RBP6.36□□□□□ -1.39
UBE2F-204ENST00000409953 NIPAL4Q0D2K0 466 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 SCGB2A2Q13296 93 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 SPARCL1Q14515 664 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 STK38Q15208 465 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 RCN1Q15293 331 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 KBTBD12Q3ZCT8 623 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 MMEL1Q495T6 779 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 KRBOX4Q5JUW0 171 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 HHATQ5VTY9 493 aa6.36□□□□□ -1.39
UBE2F-204ENST00000409953 METTL11BQ5VVY1 283 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms