RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 HDXQ7Z353 690 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 GALNT16Q8N428 558 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 GBP7Q8N8V2 638 aaPredicted RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 FDCSPQ8NFU4 85 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 SLC39A7Q92504 469 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 VIPAS39Q9H9C1 493 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 PRTFDC1Q9NRG1 225 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 VPS29Q9UBQ0 182 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 C19orf25Q9UFG5 118 aaPredicted RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 ADAM29Q9UKF5 820 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 PCDHGA9Q9Y5G4 932 aaKnown RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 BSNQ9UPA5 3926 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 NSG1A0A0A6YYJ2 146 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 TMEM120BA0PK00 339 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 PDGFAP04085 211 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 UROSP10746 265 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 SFT2D3Q587I9 215 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 CLEC6AQ6EIG7 209 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 COMMD6Q7Z4G1 85 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 GPR180Q86V85 440 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 NUDCD3Q8IVD9 361 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 PARP9Q8IXQ6 854 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 CHTF18Q8WVB6 975 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 NUDT9Q9BW91 350 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 RIC8BQ9NVN3 520 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 LYARQ9NX58 379 aaKnown RBP20.99■□□□□ 0.95
PTCD3-203ENST00000409783 AHSPQ9NZD4 102 aa20.99■□□□□ 0.95
PTCD3-203ENST00000409783 MRPS33Q9Y291 106 aaKnown RBP20.99■□□□□ 0.95
PTCD3-203ENST00000409783 A6NL46 340 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 MKRN2OSH3BPM6 223 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 PROM1O43490 865 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 SEC24DO94855 1032 aaPredicted RBP20.98■□□□□ 0.95
PTCD3-203ENST00000409783 FGF4P08620 206 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 FAM58BPP0C7Q3 252 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 CPN2P22792 545 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 SERPINB5P36952 375 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 SLC18A1P54219 525 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 WDR4P57081 412 aaKnown RBP20.98■□□□□ 0.95
PTCD3-203ENST00000409783 HMGCS1Q01581 520 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 TNFRSF17Q02223 184 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 TCTN3Q6NUS6 607 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 TRIM46Q7Z4K8 759 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 C11orf24Q96F05 449 aaPredicted RBP20.98■□□□□ 0.95
PTCD3-203ENST00000409783 SH3GL2Q99962 352 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 TUBB6Q9BUF5 446 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 SLC25A23Q9BV35 468 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 MS4A12Q9NXJ0 267 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 PHF11Q9UIL8 331 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 CCL27Q9Y4X3 112 aa20.98■□□□□ 0.95
PTCD3-203ENST00000409783 A0A1W2PR48 441 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 WDR91A4D1P6 747 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 CLDN4O14493 209 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 AZIN1O14977 448 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 CTNSO60931 367 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 KLK1P06870 262 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 CELA2AP08217 269 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 SFTPCP11686 197 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 OR4D2P58180 307 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 MYBPC3Q14896 1274 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 UGT3A2Q3SY77 523 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 KANK2Q63ZY3 851 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 C18orf63Q68DL7 685 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 RNF165Q6ZSG1 346 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 C1orf52Q8N6N3 182 aaKnown RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 EFCAB3Q8N7B9 438 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 C9orf43Q8TAL5 461 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 SREK1Q8WXA9 508 aaKnown RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 PSMF1Q92530 271 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 ANKRD9Q96BM1 317 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 SLC25A18Q9H1K4 315 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 ZNF552Q9H707 407 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 NMRK1Q9NWW6 199 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 TP53TG5Q9Y2B4 290 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 BOD1L1Q8NFC6 3051 aa20.97■□□□□ 0.95
PTCD3-203ENST00000409783 SMG1Q96Q15 3661 aaKnown RBP20.97■□□□□ 0.95
PTCD3-203ENST00000409783 COL6A6A6NMZ7 2263 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 BLACEA4D250 179 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 TMEM233B4DJY2 109 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 PRKRAO75569 313 aaKnown RBP20.96■□□□□ 0.95
PTCD3-203ENST00000409783 SASH3O75995 380 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 PRR35P0CG20 571 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 NR1D1P20393 614 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 RAE1P78406 368 aaKnown RBP20.96■□□□□ 0.95
PTCD3-203ENST00000409783 RAPSNQ13702 412 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 CHI3L2Q15782 390 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 TTMPQ5BVD1 217 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 PAPD4Q6PIY7 484 aaKnown RBP20.96■□□□□ 0.95
PTCD3-203ENST00000409783 CYP20A1Q6UW02 462 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 PAGE2Q7Z2X7 111 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 CLNKQ7Z7G1 428 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 ANKRD42Q8N9B4 389 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 UCN3Q969E3 161 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 APIPQ96GX9 242 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 SMAD5Q99717 465 aaKnown RBP20.96■□□□□ 0.95
PTCD3-203ENST00000409783 TUBB1Q9H4B7 451 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 TEX10Q9NXF1 929 aaPredicted RBP20.96■□□□□ 0.95
PTCD3-203ENST00000409783 GPR83Q9NYM4 423 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 DNAJC15Q9Y5T4 150 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 SPACA6W5XKT8 324 aa20.96■□□□□ 0.95
PTCD3-203ENST00000409783 ITM2AO43736 263 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms