RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C11orf65Q8NCR3 313 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 OR4K3Q96R72 315 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 CCNB1IP1Q9NPC3 277 aa12.8□□□□□ -0.36
COL6A2-204ENST00000409416 JRKO75564 520 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 AK4P27144 223 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 GZMMP51124 257 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SCARB2Q14108 478 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ZC3H14Q6PJT7 736 aaKnown RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 VN1R2Q8NFZ6 395 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 BTN2A2Q8WVV5 523 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 CAPSLQ8WWF8 208 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 TMEM184CQ9NVA4 438 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 RUVBL1Q9Y265 456 aaKnown RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ABHD14A-ACY1A0A1B0GW23 586 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 IGFBP4P22692 258 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PTPN6P29350 595 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 CD40LGP29965 261 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 AVPR1BP47901 424 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF404Q494X3 552 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF805Q5CZA5 627 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SERPINA11Q86U17 422 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ADIPOR2Q86V24 386 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 TSPYL5Q86VY4 417 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 NPAS3Q8IXF0 933 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 Q8N9G6 341 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 MROQ9BYG7 248 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 NLNQ9BYT8 704 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 DUSP21Q9H596 190 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SLC6A14Q9UN76 642 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PCYT1BQ9Y5K3 369 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 A8MV72 311 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SNPHO15079 494 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 AQP9O43315 295 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 JUPP14923 745 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 CRISP3P54108 245 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 MAP4K2Q12851 820 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 CSTF3Q12996 717 aaKnown RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SLC5A12Q1EHB4 618 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ARMCX4Q5H9R4 360 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 ERICH5Q6P6B1 374 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 TMIGD1Q6UXZ0 262 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 AMZ2Q86W34 360 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 METTL27Q8N6F8 245 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 TESCQ96BS2 214 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 NIPSNAP1Q9BPW8 284 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 RPP25Q9BUL9 199 aaKnown RBP12.79□□□□□ -0.36
COL6A2-204ENST00000409416 TVP23BQ9NYZ1 205 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 SLC23A2Q9UGH3 650 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 MAN2B2Q9Y2E5 1009 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 GPR52Q9Y2T5 361 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 PCDHGB3Q9Y5G1 929 aa12.79□□□□□ -0.36
COL6A2-204ENST00000409416 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 TRBC2A0A5B9 178 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PCDH17O14917 1159 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SOCS5O75159 536 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ST3GAL4Q11206 333 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PPIGQ13427 754 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 C1orf61Q13536 156 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 FAM83HQ6ZRV2 1179 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CBLL1Q75N03 491 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 OR8K5Q8NH50 307 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 UBTD2Q8WUN7 234 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ZCCHC3Q9NUD5 404 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 DDX28Q9NUL7 540 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 H0Y8X5 98 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 M0R3H8 397 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ERI3O43414 337 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 CYP17A1P05093 508 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 SDHBP21912 280 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 LBX1P52954 281 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 RAB15P59190 212 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 KEAP1Q14145 624 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 ZNF234Q14588 700 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 TPRG1LQ5T0D9 272 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 KHDRBS2Q5VWX1 349 aaKnown RBP12.78□□□□□ -0.36
COL6A2-204ENST00000409416 BRAT1Q6PJG6 821 aa12.78□□□□□ -0.36
COL6A2-204ENST00000409416 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms