RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 HOMER3Q9NSC5 361 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PIGVQ9NUD9 493 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TAS2R3Q9NYW6 316 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PILRBQ9UKJ0 227 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 SH3GLB1Q9Y371 365 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 TMED7Q9Y3B3 224 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 SELENOKQ9Y6D0 94 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 MED1Q15648 1581 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 PLEKHG2Q9H7P9 1386 aa4.26□□□□□ -1.73
HMGB3P18-201ENST00000406327 LRRC37A3O60309 1634 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCDC162PA2VCL2 907 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 NKX6-3A6NJ46 265 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 H3BMM5 538 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCL24O00175 119 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 TLR4O00206 839 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 NDC80O14777 642 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 PSMD3O43242 534 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 KRT36O76013 467 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR6A2O95222 327 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 PRSS1P07477 247 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 F7P08709 466 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CYP3A5P20815 502 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 AADACP22760 399 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 ACP1P24666 158 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 ALDH1B1P30837 517 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 DUTP33316 252 aaKnown RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 DCTP40126 519 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 HSPA2P54652 639 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 HTD2P86397 168 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCZ1BP86790 482 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCZ1P86791 482 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 GCNT1Q02742 428 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC39A6Q13433 755 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SQLEQ14534 574 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 XKR3Q5GH77 459 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 WDR38Q5JTN6 314 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 TCEAL6Q6IPX3 200 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC27A4Q6P1M0 643 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 DHRS11Q6UWP2 260 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 OLFM4Q6UX06 510 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 ELMOD1Q8N336 334 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 STPG4Q8N801 248 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 KBTBD3Q8NAB2 608 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 TMEM185AQ8NFB2 350 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 GPRC5AQ8NFJ5 357 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 OLIG1Q8TAK6 271 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SPATA18Q8TC71 538 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 FCAMRQ8WWV6 532 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 GIMAP5Q96F15 307 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 NKX3-1Q99801 234 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SPAG8Q99932 426 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 SHARPINQ9H0F6 387 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 ABCG4Q9H172 646 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CARD9Q9H257 536 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 KCNMB3Q9NPA1 279 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 POLE3Q9NRF9 147 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 ACOXLQ9NUZ1 547 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 EXOC7Q9UPT5 735 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 MRPS2Q9Y399 296 aaKnown RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 MARF1Q9Y4F3 1742 aaKnown RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 CPDO75976 1380 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 DLG5Q8TDM6 1919 aa4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 RGPD8O14715 1765 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P18-201ENST00000406327 PXDNQ92626 1479 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 USP42Q9H9J4 1324 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 TNS3Q68CZ2 1445 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 MACROD2A1Z1Q3 448 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CHEK1O14757 476 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SYT7O43581 403 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIF5CO60282 957 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CIDEAO60543 219 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CYTIPO60759 359 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 NOL3O60936 208 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 NTN1O95631 604 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CXCL14O95715 111 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CLPTM1O96005 669 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CXCL10P02778 98 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 IGKV5-2P06315 115 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 PGK2P07205 417 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 FRMD6-AS1P0C7T7 363 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC2A2P11168 524 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ETS1P14921 441 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CTNNA2P26232 953 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 MARK3P27448 753 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCND2P30279 289 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 HPDP32754 393 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CNN1P51911 297 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 DCDC1P59894 354 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ILF3Q12906 894 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 GIT2Q14161 759 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 GCKRQ14397 625 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 KRT31Q15323 416 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 STX1AQ16623 288 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC25A53Q5H9E4 307 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF776Q68DI1 518 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms