RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ACSM2AQ08AH3 577 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 DNASE1L3Q13609 305 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 SLC9A5Q14940 896 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 TCHHL1Q5QJ38 904 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 ACSM2BQ68CK6 577 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 FAM199XQ6PEV8 388 aaPredicted RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 RNF165Q6ZSG1 346 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 TRIM46Q7Z4K8 759 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 ACOT4Q8N9L9 421 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 OR51Q1Q8NH59 317 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 TWIST2Q8WVJ9 160 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 MIEF2Q96C03 454 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 SMIM10Q96HG1 83 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 METTL2AQ96IZ6 378 aaKnown RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 VPS50Q96JG6 964 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 MAGEB18Q96M61 343 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 OR1F2PQ96R84 312 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 HBEGFQ99075 208 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 SLC26A1Q9H2B4 701 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 FARSBQ9NSD9 589 aaKnown RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 LYARQ9NX58 379 aaKnown RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 MS4A12Q9NXJ0 267 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 HCN3Q9P1Z3 774 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 ZDHHC2Q9UIJ5 367 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 PHF11Q9UIL8 331 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 ADAM29Q9UKF5 820 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 MRPS33Q9Y291 106 aaKnown RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 MRPS2Q9Y399 296 aaKnown RBP9.96□□□□□ -0.82
RPAIN-204ENST00000405578 APCP25054 2843 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.82
RPAIN-204ENST00000405578 A0A0G2JN53 185 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 WIPF3A6NGB9 483 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF860A6NHJ4 632 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 CLDN4O14493 209 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PLPP1O14494 284 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 SNNO75324 88 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 RSL1D1O76021 490 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 SCELO95171 688 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MED26O95402 600 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 TBX6O95947 436 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ATP5A1P25705 553 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 CERS1P27544 350 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 BUD31P41223 144 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 FOLR3P41439 243 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 XCR1P46094 333 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 HTR6P50406 440 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 SLAMF1Q13291 335 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MRPL49Q13405 166 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 NR6A1Q15406 480 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 EIF2S3LQ2VIR3 472 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MINDY4Q4G0A6 757 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MFSD4BQ5TF39 518 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 SCIMPQ6UWF3 145 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 FAM198BQ6UWH4 519 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PRSS41Q7RTY9 318 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PDSS2Q86YH6 399 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 METTL4Q8N3J2 472 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ZCCHC7Q8N3Z6 543 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 RNF175Q8N4F7 328 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF781Q8N8C0 355 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ENDOVQ8N8Q3 282 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 C7orf57Q8NEG2 295 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 CKAP2Q8WWK9 683 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 TBC1D20Q96BZ9 403 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 C19orf60Q96EN9 201 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PPP3R2Q96LZ3 170 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 C7orf26Q96N11 449 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MRPL1Q9BYD6 325 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ACPTQ9BZG2 426 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 TGIF2Q9GZN2 237 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 WDR41Q9HAD4 459 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 LYRM4Q9HD34 91 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PRDM7Q9NQW5 492 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 VTI1BQ9UEU0 232 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PTRH2Q9Y3E5 179 aaKnown RBP9.95□□□□□ -0.82
RPAIN-204ENST00000405578 PCDHGA6Q9Y5G7 932 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 DNAJC15Q9Y5T4 150 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 MED13LQ71F56 2210 aa9.95□□□□□ -0.82
RPAIN-204ENST00000405578 ADGRG4Q8IZF6 3080 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 DIDO1Q9BTC0 2240 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CROCCQ5TZA2 2017 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 IGLV3-12A0A075B6K2 115 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 GNG14A0A1W2PPG7 69 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 SYNDIG1LA6NDD5 238 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 TRPC5OSA6NMA1 111 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 TMEM233B4DJY2 109 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 RTCAO00442 366 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PCDH17O14917 1159 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PIP5K1BO14986 540 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CHST10O43529 356 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 SEC22BO75396 215 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ETHE1O95571 254 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 IGHEP01854 428 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 KLK1P06870 262 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 HEXBP07686 556 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 FHP07954 510 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms