RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 H3BN98 237 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 MYL12BO14950 172 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
APOB-202ENST00000399256 HOXD10P28358 340 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 CAV3P56539 151 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 CDK6Q00534 326 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 PCDH1Q08174 1060 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 PLET1Q6UQ28 207 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 DPY19L3Q6ZPD9 716 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 TCTE3Q8IZS6 198 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 FAM109AQ8N4B1 249 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 CELF5Q8N6W0 485 aaKnown RBP13.36□□□□□ -0.27
APOB-202ENST00000399256 OR4M1Q8NGD0 313 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 ANGPTL6Q8NI99 470 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 SLC6A18Q96N87 628 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■□□□ 12.6
APOB-202ENST00000399256 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 ENPP4Q9Y6X5 453 aa13.36□□□□□ -0.27
APOB-202ENST00000399256 LOC105371267A0A1B0GV96 52 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 A8MVJ9 347 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 BNIP3LO60238 219 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 PCSK2P16519 638 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 APEX1P27695 318 aaKnown RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 GPR17Q13304 367 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 THOC6Q86W42 341 aaKnown RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 SYT14Q8NB59 555 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 NELL2Q99435 816 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 TSSK6Q9BXA6 273 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 TEKT2Q9UIF3 430 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 EXO1Q9UQ84 846 aaKnown RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 AP1M2Q9Y6Q5 423 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 POLR1CO15160 346 aaPredicted RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 OR56A5P0C7T3 313 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 ITGB7P26010 798 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 SDC2P34741 201 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 ASMTP46597 345 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 GZMKP49863 264 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 C21orf58P58505 322 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 MC1RQ01726 317 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 NFE2L1Q14494 772 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 LIPJQ5W064 366 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 C11orf74Q86VG3 221 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 APCDD1Q8J025 514 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 NANOGP1Q8N7R0 232 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 GALNT6Q8NCL4 622 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 C11orf24Q96F05 449 aaPredicted RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 ZNF717Q9BY31 904 aaPredicted RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 TMEM245Q9H330 911 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 CWH43Q9H720 699 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 ZNF840PA6NDX5 716 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 HLA-DMAP28067 261 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 SOAT1P35610 550 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 CHI3L1P36222 383 aaPredicted RBP13.35□□□□□ -0.27
APOB-202ENST00000399256 MAP2K3P46734 347 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 LRRC73Q5JTD7 316 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 DDI2Q5TDH0 399 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 CCDC28AQ8IWP9 274 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 OR52N2Q8NGI0 321 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 PLD4Q96BZ4 506 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 MSLNLQ96KJ4 702 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 FZD3Q9NPG1 666 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 TMPRSS11EQ9UL52 423 aa13.35□□□□□ -0.27
APOB-202ENST00000399256 RNASET2O00584 256 aaKnown RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 FFAR1O14842 300 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 RECKO95980 971 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 ALAS2P22557 587 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 HMGA2P52926 109 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 LIM2P55344 173 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 FCHO2Q0JRZ9 810 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 C1DQ13901 141 aaKnown RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 ZNF770Q6IQ21 691 aaPredicted RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 IQCF1Q8N6M8 205 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 ZNF296Q8WUU4 475 aaPredicted RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 MAP6Q96JE9 813 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 GFM1Q96RP9 751 aaKnown RBP13.34□□□□□ -0.27
APOB-202ENST00000399256 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 TMCC3Q9ULS5 477 aa13.34□□□□□ -0.27
APOB-202ENST00000399256 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms