RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 UBLCP1Q8WVY7 318 aaPredicted RBP12.66□□□□□ -0.38
PFDN6-204ENST00000395131 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
PFDN6-204ENST00000395131 PRAP1Q96NZ9 151 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 PRDM14Q9GZV8 571 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 GOLPH3Q9H4A6 298 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 CXorf56Q9H5V9 222 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
PFDN6-204ENST00000395131 PRDM9Q9NQV7 894 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 ATG4BQ9Y4P1 393 aa12.66□□□□□ -0.38
PFDN6-204ENST00000395131 ROS1P08922 2347 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 E7ENX8 843 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 CHST10O43529 356 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 B4GALT2O60909 372 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 RBL1P28749 1068 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 GNGT1P63211 74 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 CAV1Q03135 178 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 TAP2Q03519 686 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 DHX9Q08211 1270 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 CRYZQ08257 329 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 HERC3Q15034 1050 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 TTMPQ5BVD1 217 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 DUPD1Q68J44 220 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 LRRC25Q8N386 305 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 ZCCHC10Q8TBK6 192 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 SKA2Q8WVK7 121 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 ZBED6CLQ96FA7 236 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 MARK4Q96L34 752 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 TIMP4Q99727 224 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 CCDC77Q9BR77 488 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 NECTIN3Q9NQS3 549 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 DDX56Q9NY93 547 aaKnown RBP12.65□□□□□ -0.38
PFDN6-204ENST00000395131 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
PFDN6-204ENST00000395131 NINQ8N4C6 2090 aa12.65□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF860A6NHJ4 632 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF839A8K0R7 811 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 A8MUA0 341 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 GALR3O60755 368 aaPredicted RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 RFPL3SP0C7P2 107 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 MAOAP21397 527 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 ECHS1P30084 290 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 VEZF1Q14119 521 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 POU6F1Q14863 301 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 NIPAL1Q6NVV3 410 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 LRRC56Q8IYG6 542 aaPredicted RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 BBOF1Q8ND07 529 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 OR13J1Q8NGT2 312 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 NCLNQ969V3 563 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 BEX2Q9BXY8 128 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 CLK4Q9HAZ1 481 aaKnown RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 SAMD15Q9P1V8 674 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 LPAR3Q9UBY5 353 aa12.64□□□□□ -0.39
PFDN6-204ENST00000395131 R3HDM2Q9Y2K5 976 aaKnown RBP12.64□□□□□ -0.39
PFDN6-204ENST00000395131 A8MXE2 369 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 PRMT5O14744 637 aaPredicted RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 MYO1DO94832 1006 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 GOT2P00505 430 aaKnown RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 KRT14P02533 472 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 P04436 131 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ATP5DP30049 168 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 COILP38432 576 aaPredicted RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 HYAL2Q12891 473 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 CALCOCO2Q13137 446 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 GBX1Q14549 363 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 P3H1Q32P28 736 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ODF2Q5BJF6 829 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 C6orf52Q5T4I8 152 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ASPGQ86U10 573 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF441Q8N8Z8 693 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ALG3Q92685 438 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 WFIKKN1Q96NZ8 548 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 HS3ST6Q96QI5 342 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 PKP4Q99569 1192 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 P2RY12Q9H244 342 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 SLC6A15Q9H2J7 730 aa12.63□□□□□ -0.39
PFDN6-204ENST00000395131 LIN28AQ9H9Z2 209 aaKnown RBP12.63□□□□□ -0.39
PFDN6-204ENST00000395131 ZFP64Q9NPA5 681 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms