RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SCN2AQ99250 2005 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 SMIM23A6NLE4 172 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 KRT15P19012 456 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 ATP5F1P24539 256 aaPredicted RBP22.37■■□□□ 1.17
PFDN2-201ENST00000368010 PPP2R1BP30154 601 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 CDH13P55290 713 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 STX4Q12846 297 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 RPS27LQ71UM5 84 aaKnown RBP22.37■■□□□ 1.17
PFDN2-201ENST00000368010 SERPINI1Q99574 410 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 ADAP2Q9NPF8 381 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 PHF11Q9UIL8 331 aa22.37■■□□□ 1.17
PFDN2-201ENST00000368010 A0A1W2PPM1 405 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 DLX3O60479 287 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 GLRA3O75311 464 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 SLU7O95391 586 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 ETHE1O95571 254 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 TSPAN8P19075 237 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 VSNL1P62760 191 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 IFT88Q13099 833 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 SERTAD2Q14140 314 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 RASA2Q15283 850 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 ELAVL1Q15717 326 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 INAQ16352 499 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 FAM180AQ6UWF9 173 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 RPS19BP1Q86WX3 136 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 NUDT13Q86X67 352 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 SLC22A9Q8IVM8 553 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 MTFMTQ96DP5 389 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 BARD1Q99728 777 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 NPAS2Q99743 824 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 UTP23Q9BRU9 249 aaKnown RBP22.36■■□□□ 1.17
PFDN2-201ENST00000368010 ELOVL6Q9H5J4 265 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 CNTRLQ7Z7A1 2325 aa22.36■■□□□ 1.17
PFDN2-201ENST00000368010 SHANK1Q9Y566 2161 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 PRAMEF2O60811 474 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 SUPT7LO94864 414 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 SEMA3DO95025 777 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 IFNA16P05015 189 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 HSD17B3P37058 310 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 CLCN2P51788 898 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 CLCQ05315 142 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 ZNF678Q5SXM1 525 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 GPR180Q86V85 440 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 C7orf57Q8NEG2 295 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 EPS8L3Q8TE67 593 aaKnown RBP22.35■■□□□ 1.17
PFDN2-201ENST00000368010 GRHL3Q8TE85 626 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 TRPC4APQ8TEL6 797 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 VMP1Q96GC9 406 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 TMEM237Q96Q45 408 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 ZNF717Q9BY31 904 aaPredicted RBP22.35■■□□□ 1.17
PFDN2-201ENST00000368010 ALOXE3Q9BYJ1 711 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 DEFB126Q9BYW3 111 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 CDCP1Q9H5V8 836 aa22.35■■□□□ 1.17
PFDN2-201ENST00000368010 LYARQ9NX58 379 aaKnown RBP22.35■■□□□ 1.17
PFDN2-201ENST00000368010 PPIEQ9UNP9 301 aaKnown RBP22.35■■□□□ 1.17
PFDN2-201ENST00000368010 TRBV11-1A0A0K0K1C0 115 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 GABRR3A8MPY1 467 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 MAN1A2O60476 641 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 LDB3O75112 727 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 CDH16O75309 829 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 BSGP35613 385 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 TNFRSF17Q02223 184 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 MRPL49Q13405 166 aaKnown RBP22.34■■□□□ 1.17
PFDN2-201ENST00000368010 TUBA3CQ13748 450 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 NR6A1Q15406 480 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 UNC50Q53HI1 259 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 LETMD1Q6P1Q0 360 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 TUBA3EQ6PEY2 450 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 CYP20A1Q6UW02 462 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 TMEM132CQ8N3T6 1108 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 APCDD1LQ8NCL9 501 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 MYRIPQ8NFW9 859 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 DDX31Q9H8H2 851 aaKnown RBP22.34■■□□□ 1.17
PFDN2-201ENST00000368010 ANKRD10Q9NXR5 420 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 VTI1BQ9UEU0 232 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 TRPS1Q9UHF7 1281 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 CLCA3PQ9Y6N3 262 aa22.34■■□□□ 1.17
PFDN2-201ENST00000368010 A0A0A6YYD5 115 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 A0A1B0GTL3 188 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 PPP6CO00743 305 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 CDK2AP1O14519 115 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 EEDO75530 441 aaKnown RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 IMPDH1P20839 514 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 TLX1P31314 330 aaPredicted RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 BUD31P41223 144 aaPredicted RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 PRKAA2P54646 552 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 HNRNPH2P55795 449 aaKnown RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 OC90Q02509 493 aaPredicted RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 SGO1Q5FBB7 561 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 FAR1Q8WVX9 515 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 DAZLQ92904 295 aaKnown RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 RPF2Q9H7B2 306 aaKnown RBP22.33■■□□□ 1.17
PFDN2-201ENST00000368010 SNX6Q9UNH7 406 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 ATG4BQ9Y4P1 393 aa22.33■■□□□ 1.17
PFDN2-201ENST00000368010 FOXO6A8MYZ6 492 aa22.32■■□□□ 1.16
PFDN2-201ENST00000368010 OR4F21O95013 312 aa22.32■■□□□ 1.16
PFDN2-201ENST00000368010 TNNI3P19429 210 aa22.32■■□□□ 1.16
PFDN2-201ENST00000368010 TPP2P29144 1249 aaPredicted RBP22.32■■□□□ 1.16
PFDN2-201ENST00000368010 CD96P40200 585 aa22.32■■□□□ 1.16
PFDN2-201ENST00000368010 CCT5P48643 541 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms