RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 OR8K3Q8NH51 312 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 FAM57AQ8TBR7 257 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 EXT2Q93063 718 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CSF3RQ99062 836 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 ALOXE3Q9BYJ1 711 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 RYDENQ9NUL5 291 aaKnown RBP13.8□□□□□ -0.2
CTSD-202ENST00000367196 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 OPTCQ9UBM4 332 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 ZNF223Q9UK11 482 aaPredicted RBP13.8□□□□□ -0.2
CTSD-202ENST00000367196 ZNF490Q9ULM2 529 aaPredicted RBP13.8□□□□□ -0.2
CTSD-202ENST00000367196 ASB1Q9Y576 335 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CCDC189A1A4V9 331 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 SUPT3HB4E1H0 165 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 TGFBR3LH3BV60 316 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 RAD51CO43502 376 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 HS6ST1O60243 411 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 KERAO60938 352 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 SUPT3HO75486 399 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 OR2J2O76002 312 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 SCELO95171 688 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 TBX6O95947 436 aaPredicted RBP13.79□□□□□ -0.2
CTSD-202ENST00000367196 TPOP07202 933 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 SNRPB2P08579 225 aaKnown RBP13.79□□□□□ -0.2
CTSD-202ENST00000367196 TNNI3P19429 210 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 PPP2R1BP30154 601 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 CASP2P42575 452 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 PLGLB1Q02325 96 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 BIKQ13323 160 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 E2F2Q14209 437 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 FBXO48Q5FWF7 155 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 NDUFAF5Q5TEU4 345 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 GK5Q6ZS86 529 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 CD163Q86VB7 1156 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 SLC22A16Q86VW1 577 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 PPM1NQ8N819 430 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 TMEM52Q8NDY8 209 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 UBTD2Q8WUN7 234 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 ESAMQ96AP7 390 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 CMTM7Q96FZ5 175 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 F2RL3Q96RI0 385 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 DMRTA2Q96SC8 542 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 MS4A8Q9BY19 250 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 TP63Q9H3D4 680 aaPredicted RBP13.79□□□□□ -0.2
CTSD-202ENST00000367196 ALG9Q9H6U8 611 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 PRDM7Q9NQW5 492 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 KCMF1Q9P0J7 381 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 CLDN16Q9Y5I7 305 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 APCP25054 2843 aa13.79□□□□□ -0.2
CTSD-202ENST00000367196 A0A1B0GTH9 108 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 C17orf105B2RV13 164 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 K7EPI3 171 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 LTA4HP09960 611 aaKnown RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 SLC35E2BP0CK96 405 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 PCNAP12004 261 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 CD22P20273 847 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 HIST1H1TP22492 207 aaPredicted RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 ATP5A1P25705 553 aaKnown RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 RFC3P40938 356 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 SSR2P43308 183 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 PLTPP55058 493 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 GPR85P60893 370 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 KBTBD12Q3ZCT8 623 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 OPN5Q6U736 354 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 RTL4Q6ZR62 310 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 MDGA2Q7Z553 956 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 CCDC25Q86WR0 208 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 CHERPQ8IWX8 916 aaKnown RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 LAS2Q8IYD9 372 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 ACOT4Q8N9L9 421 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 GOLM1Q8NBJ4 401 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 ZNF473Q8WTR7 871 aaKnown RBP13.78□□□□□ -0.2
CTSD-202ENST00000367196 ASB5Q8WWX0 329 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 SDCCAG3Q96C92 435 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 REPS1Q96D71 796 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 ART5Q96L15 291 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 SGCZQ96LD1 299 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 RASL10BQ96S79 203 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 SPOCK3Q9BQ16 436 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 TRIM8Q9BZR9 551 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■□□□ 11.5
CTSD-202ENST00000367196 GRHL1Q9NZI5 618 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 ANGPTL3Q9Y5C1 460 aa13.78□□□□□ -0.2
CTSD-202ENST00000367196 PRAMEF4O60810 478 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 EPB42P16452 691 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 CPN2P22792 545 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 TLX1P31314 330 aaPredicted RBP13.77□□□□□ -0.21
CTSD-202ENST00000367196 CASQ1P31415 396 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 RAP1GDS1P52306 607 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 HK2P52789 917 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 ARFIP1P53367 373 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 GPX6P59796 221 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 RNF4P78317 190 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PCDH1Q08174 1060 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms