RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PTGER1P34995 402 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 GPC1P35052 558 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 DSTNP60981 165 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 HOXC5Q00444 222 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 MRPL28Q13084 256 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 MRPL58Q14197 206 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 HEPACAMQ14CZ8 416 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SNAPC1Q16533 368 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ZNF284Q2VY69 593 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CCDC58Q4VC31 144 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SPIN4Q56A73 249 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 DDI2Q5TDH0 399 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 OLIG3Q7RTU3 272 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ZNF438Q7Z4V0 828 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 NOXA1Q86UR1 476 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 RBM45Q8IUH3 476 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 OXR1Q8N573 874 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SYT14Q8NB59 555 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 CHST14Q8NCH0 376 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ATP6V1C2Q8NEY4 427 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 BCL7CQ8WUZ0 217 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 XAGE5Q8WWM1 108 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 GATAD2BQ8WXI9 593 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ASB15Q8WXK1 588 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TRIM63Q969Q1 353 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SCRN2Q96FV2 425 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ART5Q96L15 291 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SDHCQ99643 169 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 TM9SF2Q99805 663 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 RIOK2Q9BVS4 552 aaKnown RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 KLF16Q9BXK1 252 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 BARHL1Q9BZE3 327 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 UCK2Q9BZX2 261 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 C11orf54Q9H0W9 315 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 STARD7Q9NQZ5 370 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 STOX2Q9P2F5 926 aaPredicted RBP7.82□□□□□ -1.16
CD46-208ENST00000367042 GULP1Q9UBP9 304 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SEC14L3Q9UDX4 400 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 ENPP4Q9Y6X5 453 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 A3GALT2U3KPV4 340 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 NUMA1Q14980 2115 aa7.82□□□□□ -1.16
CD46-208ENST00000367042 TRBV5-4A0A0C4DH59 114 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 MPZL2O60487 215 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SOCS5O75159 536 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GCM2O75603 506 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 ARHGEF15O94989 841 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SEMG1P04279 462 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 IL3P08700 152 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 HMGA1P17096 107 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 PTX3P26022 381 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 CTGFP29279 349 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PDHA2P29803 388 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CSTF2P33240 577 aaKnown RBP eCLIP7.81□□□□□ -1.16
CD46-208ENST00000367042 SPINT3P49223 89 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CLEC12AQ5QGZ9 265 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 OR2G6Q5TZ20 316 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 ADCK2Q7Z695 626 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 TSEN54Q7Z6J9 526 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 LAPTM4BQ86VI4 370 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
CD46-208ENST00000367042 CFAP206Q8IYR0 622 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 JPH3Q8WXH2 748 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 EXOSC8Q96B26 276 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 TRMT61AQ96FX7 289 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 ST6GAL2Q96JF0 529 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SIGLEC11Q96RL6 698 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 MCCC1Q96RQ3 725 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 NELL2Q99435 816 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SLX1AQ9BQ83 275 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 MND1Q9BWT6 205 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 RACGAP1Q9H0H5 632 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 HDHD2Q9H0R4 259 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 LINC00597Q9H2U6 94 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CWH43Q9H720 699 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 TRIM45Q9H8W5 580 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 HHATLQ9HCP6 504 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SEC14L4Q9UDX3 406 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 BTNL2Q9UIR0 455 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GPR52Q9Y2T5 361 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GRIP1Q9Y3R0 1128 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GBF1Q92538 1859 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SLC28A2O43868 658 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 ADAMTS4O75173 837 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SEMA3DO95025 777 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 CH25HO95992 272 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 NR2F6P10588 404 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 SLC2A2P11168 524 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 HOXB9P17482 250 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 ACLYP53396 1101 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GNG2P59768 71 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 ZNF91Q05481 1191 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 PIN1Q13526 163 aaPredicted RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 GPR50Q13585 617 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 GPAT3Q53EU6 434 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 METTL2BQ6P1Q9 378 aaKnown RBP7.81□□□□□ -1.16
CD46-208ENST00000367042 TMEM220Q6QAJ8 160 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 RRM2BQ7LG56 351 aa7.81□□□□□ -1.16
CD46-208ENST00000367042 OR52N2Q8NGI0 321 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms