RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TMEM145Q8NBT3 493 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 GATAD2BQ8WXI9 593 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 NARS2Q96I59 477 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 NELL2Q99435 816 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 GTPBP2Q9BX10 602 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 PPA2Q9H2U2 334 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CLMPQ9H6B4 373 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ARNT2Q9HBZ2 717 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CTPS2Q9NRF8 586 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 RBFOX1Q9NWB1 397 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CEP290O15078 2479 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 CLDN7O95471 211 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 PEX11BO96011 259 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 IFNA7P01567 189 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 IGSF11Q5DX21 431 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 IL20RBQ6UXL0 311 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 MEX3DQ86XN8 651 aaKnown RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 LKAAEAR1Q8TD35 194 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TTC9Q92623 222 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 REPS1Q96D71 796 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 HCN3Q9P1Z3 774 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 SEC14L4Q9UDX3 406 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 STUB1Q9UNE7 303 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TRAPPC4Q9Y296 219 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 MANBAO00462 879 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 CSO75390 466 aaKnown RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 GJB5O95377 273 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 PDYNP01213 254 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 APOC3P02656 99 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 LHCGRP22888 699 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 CFL1P23528 166 aaKnown RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 ATP6V1E1P36543 226 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TEKQ02763 1124 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 ATP13A5Q4VNC0 1218 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 OTUB1Q96FW1 271 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TPT1P8Q9HAU6 139 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 SLC22A14Q9Y267 594 aa12.16□□□□□ -0.46
VAMP1-201ENST00000361716 LOC285095A0A1B0GVY8 99 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TRIM77I1YAP6 450 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TOR1AO14656 332 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 CACNG3O60359 315 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 OR10H3O60404 316 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 KCNK5O95279 499 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 HLA-DMAP28067 261 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 NUP62P37198 522 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 GSTM5P46439 218 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ABRQ12979 859 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 CRHR2Q13324 411 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PUS10Q3MIT2 529 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 APIPQ96GX9 242 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 KCTD7Q96MP8 289 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ABCG5Q9H222 651 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PPT2Q9UMR5 302 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ARPC4-TTLL3A0A0A6YYG9 625 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TLX2O43763 284 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 HOXB8P17481 243 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 DNASE1P24855 282 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ITGA1P56199 1179 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 DSTNP60981 165 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 IRF8Q02556 426 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TNK1Q13470 666 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 KIAA0040Q15053 153 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 USP45Q70EL2 814 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SLC5A11Q8WWX8 675 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SLC9A6Q92581 669 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 LINC00052Q96N35 136 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SAP130Q9H0E3 1048 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 POFUT2Q9Y2G5 429 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 MAP4K5Q9Y4K4 846 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SESN1Q9Y6P5 492 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 C2orf92A0A1B0GVN3 265 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 SLC9A3R1O14745 358 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-201ENST00000361716 GADD45GO95257 159 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 DHFRP00374 187 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 ATF6P18850 670 aa12.15□□□□□ -0.46
VAMP1-201ENST00000361716 TALDO1P37837 337 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms