RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 COL9A2Q14055 689 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 SAMD12Q8N8I0 201 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 NECAB3Q96P71 396 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 NANSQ9NR45 359 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ATXN7L1Q9ULK2 861 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 DHDHQ9UQ10 334 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 EEF1E1O43324 174 aaKnown RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 CA12O43570 354 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 PLATP00750 562 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 PIGFQ07326 219 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 CCINQ13939 588 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 GLT8D1Q68CQ7 371 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF773Q6PK81 442 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 HRASLS2Q9NWW9 162 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 KLF8O95600 359 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 CFL1P23528 166 aaKnown RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 NAA10P41227 235 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 ABRAXAS2Q15018 415 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 SLC35F5Q8WV83 523 aa17.69■□□□□ 0.42
SHANK1-202ENST00000359082 NTPCRQ9BSD7 190 aaKnown RBP17.69■□□□□ 0.42
SHANK1-202ENST00000359082 C2orf74A8MZ97 194 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 DLGAP1O14490 977 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 HCRTR2O43614 444 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 PRAMEF11O60813 436 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 PFKLP17858 780 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 MAGEA11P43364 429 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 PLP2Q04941 152 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 CARM1Q86X55 608 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 GATAD2BQ8WXI9 593 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ST14Q9Y5Y6 855 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 UBR1Q8IWV7 1749 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 PRSS51A0A1B0GVH4 220 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 OTOL1A6NHN0 477 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 KCNC3Q14003 757 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 GINS1Q14691 196 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 PTGR1Q14914 329 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 LIPKQ5VXJ0 399 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 GID4Q8IVV7 300 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 TSGA13Q96PP4 275 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF821O75541 412 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 RAD51DO75771 328 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 S1PR1P21453 382 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ETV3P41162 512 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 EXOC3L2Q2M3D2 409 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ASTE1Q2TB18 679 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 SLC39A4Q6P5W5 647 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 BBS10Q8TAM1 723 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 FNIP2Q9P278 1114 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 AOC2O75106 756 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 FGF18O76093 207 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ALG10BQ5I7T1 473 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 AP1S3Q96PC3 154 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF35P13682 527 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 AOC1P19801 751 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF84P51523 738 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 WDR45BQ5MNZ6 344 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 HAGHLQ6PII5 290 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 COMTD1Q86VU5 262 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 WDR20Q8TBZ3 569 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 MAFIPQ8WZ33 124 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 KCNN1Q92952 543 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 MOAP1Q96BY2 351 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 KLHDC7BQ96G42 594 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 SLC25A44Q96H78 314 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-202ENST00000359082 NELFAQ9H3P2 528 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 B4GALT6Q9UBX8 382 aa17.68■□□□□ 0.42
SHANK1-202ENST00000359082 DLDP09622 509 aaKnown RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SCNN1AP37088 669 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 RPL26P61254 145 aaKnown RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 GALNT2Q10471 571 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 CCDC58Q4VC31 144 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 NIPAL1Q6NVV3 410 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 TMEM107Q6UX40 140 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF584Q8IVC4 421 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 GLIS1Q8NBF1 620 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF649Q9BS31 505 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 C1orf21Q9H246 121 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SLC2A4RGQ9NR83 387 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 HIF3AQ9Y2N7 669 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 OR6C74A6NCV1 312 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 TRIM64CA6NLI5 447 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SLITRK5O94991 958 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 NNATQ16517 81 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 ZNF550Q7Z398 422 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 NUP43Q8NFH3 380 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 HSPB11Q9Y547 144 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 PCDHGA6Q9Y5G7 932 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 FEZF1A0PJY2 475 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 FAM221BA6H8Z2 402 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 CD8B2A6NJW9 211 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 CD8BP10966 210 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 FBLP22087 321 aaKnown RBP17.67■□□□□ 0.42
SHANK1-202ENST00000359082 SELENOVP59797 346 aa17.67■□□□□ 0.42
SHANK1-202ENST00000359082 CDNFQ49AH0 187 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms