RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 SGK2Q9HBY8 427 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 TMEM39AQ9NV64 488 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 PLEKHB1Q9UF11 243 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 GBAP04062 536 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 GZMKP49863 264 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 RTN4RL1Q86UN2 441 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 CCDC28AQ8IWP9 274 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 ATP6V1C2Q8NEY4 427 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 C11orf24Q96F05 449 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 ASIC4Q96FT7 647 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 MED8Q96G25 268 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 MKRN2Q9H000 416 aaKnown RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 ALG5Q9Y673 324 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 VCANP13611 3396 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 TRAV19A0A0A6YYK7 116 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 TRBV4-1A0A0J9YWV2 114 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 A0A1W2PQ72 361 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 H3BN98 237 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 POLR1CO15160 346 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 INPPL1O15357 1258 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 MSL3P1P0C860 447 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 HLA-DMAP28067 261 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 HMGA2P52926 109 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 MEDAGQ5VYS4 303 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 SERPINA13PQ6UXR4 307 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 TMIGD1Q6UXZ0 262 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 C11orf74Q86VG3 221 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 SLC38A6Q8IZM9 456 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 NANOGP1Q8N7R0 232 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 ZNF557Q8N988 423 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 UCK2Q9BZX2 261 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 FZD3Q9NPG1 666 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 MALT1Q9UDY8 824 aa13.8□□□□□ -0.2
SNX20-202ENST00000330943 DNMT3AQ9Y6K1 912 aaPredicted RBP13.8□□□□□ -0.2
SNX20-202ENST00000330943 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 SMLR1H3BR10 107 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 DUSP11O75319 330 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 IL1AP01583 271 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 IFNW1P05000 195 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 CHI3L1P36222 383 aaPredicted RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 MAP2K3P46734 347 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 FCHO2Q0JRZ9 810 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 MLLT11Q13015 90 aaPredicted RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 ABI3BPQ7Z7G0 1075 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 THOC6Q86W42 341 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 CIDECQ96AQ7 238 aaPredicted RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 NELL2Q99435 816 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 CLCA3PQ9Y6N3 262 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 PCM1Q15154 2024 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 ZNF106Q9H2Y7 1883 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 ZNF840PA6NDX5 716 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 MTX2O75431 263 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 RHCEP18577 417 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 ALAS2P22557 587 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 CPN2P22792 545 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 SDC2P34741 201 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 GATMP50440 423 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 RBBP4Q09028 425 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 NCF4Q15080 339 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 USP30Q70CQ3 517 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 PLCZ1Q86YW0 608 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 TCEANCQ8N8B7 351 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 MAGEB10Q96LZ2 347 aaPredicted RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 TEKT2Q9UIF3 430 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 KLHL21Q9UJP4 597 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
SNX20-202ENST00000330943 EXO1Q9UQ84 846 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 YARS2Q9Y2Z4 477 aaKnown RBP13.79□□□□□ -0.2
SNX20-202ENST00000330943 AGAP14A8MT82 685 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 MEN1O00255 615 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 OR2B3O76000 313 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 PDE9AO76083 593 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 APEX1P27695 318 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 SOAT1P35610 550 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 MAN2A2P49641 1150 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 AP1S2P56377 157 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 SNRPGP62308 76 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 CDH18Q13634 790 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 KIAA0100Q14667 2235 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 RTP2Q5QGT7 225 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 TRIQKQ629K1 86 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 CASP12Q6UXS9 341 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
SNX20-202ENST00000330943 CLDN22Q8N7P3 220 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 SYT14Q8NB59 555 aa13.78□□□□□ -0.2
SNX20-202ENST00000330943 PROKR2Q8NFJ6 384 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms