RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ENPP4Q9Y6X5 453 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 CDH23Q9H251 3354 aa13.87□□□□□ -0.19
TPM3-206ENST00000330188 PCDH17O14917 1159 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 PDPK1O15530 556 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 LCKP06239 509 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 SERPINB1P30740 379 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 FRKP42685 505 aaPredicted RBP13.86□□□□□ -0.19
TPM3-206ENST00000330188 HMGA2P52926 109 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 MANFP55145 182 aaKnown RBP13.86□□□□□ -0.19
TPM3-206ENST00000330188 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
TPM3-206ENST00000330188 HEPACAMQ14CZ8 416 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 IRF4Q15306 451 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 CST6Q15828 149 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 DUSP7Q16829 419 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 RPS26P11Q5JNZ5 115 aaPredicted RBP13.86□□□□□ -0.19
TPM3-206ENST00000330188 UBE2UQ5VVX9 321 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 MLIPQ5VWP3 458 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
TPM3-206ENST00000330188 REEP3Q6NUK4 255 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 NATD1Q8N6N6 113 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 NDNFQ8TB73 568 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 PSD2Q9BQI7 771 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 PALMDQ9NP74 551 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 C5AR2Q9P296 337 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 STON1Q9Y6Q2 735 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 HEATR5BQ9P2D3 2071 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 CCDC88CQ9P219 2028 aa13.86□□□□□ -0.19
TPM3-206ENST00000330188 NDUFS4O43181 175 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 TMPRSS11DO60235 418 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 B4GALT2O60909 372 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 OPRL1P41146 370 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 PCBP4P57723 403 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 LSM3P62310 102 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 AGERQ15109 404 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 MLF2Q15773 248 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 TNFAIP8L2Q6P589 184 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 C7orf61Q8IZ16 206 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 APOBEC4Q8WW27 367 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 COPS4Q9BT78 406 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 PITHD1Q9GZP4 211 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 RSPH9Q9H1X1 276 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 MTIF3Q9H2K0 278 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 WDR26Q9H7D7 661 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 NEUROD4Q9HD90 331 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 A4GALTQ9NPC4 353 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 SIRT3Q9NTG7 399 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 FAIMQ9NVQ4 179 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 ZNF226Q9NYT6 803 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 ACSL5Q9ULC5 683 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 OR1F1O43749 312 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 LCMT2O60294 686 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 GADD45GO95257 159 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 FUCA1P04066 466 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 BCHEP06276 602 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 GABRB1P18505 474 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 RHCEP18577 417 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 ALDH4A1P30038 563 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 TRIM23P36406 574 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 TGFBR2P37173 567 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 RANBP1P43487 201 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 VBP1P61758 197 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 CSNK1G2P78368 415 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 DMPKQ09013 629 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 FGL2Q14314 439 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 PUM1Q14671 1186 aaKnown RBP eCLIP13.85□□□□□ -0.191e-11■■□□□ 13.1
TPM3-206ENST00000330188 C2orf27AQ580R0 203 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 UBE3DQ7Z6J8 389 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 NUDT13Q86X67 352 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 DNAJC22Q8N4W6 341 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 SLC38A5Q8WUX1 472 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 RGMAQ96B86 450 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 SH3YL1Q96HL8 342 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 QRFPRQ96P65 431 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 INSM2Q96T92 566 aaPredicted RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 PLA2G2FQ9BZM2 168 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 FKBP14Q9NWM8 211 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 ZFR2Q9UPR6 939 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 HCN4Q9Y3Q4 1203 aa13.85□□□□□ -0.19
TPM3-206ENST00000330188 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
TPM3-206ENST00000330188 A0A1W2PP55 124 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 GPR89AB7ZAQ6 455 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 CCNB2O95067 398 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 IFNW1P05000 195 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 GPR89BP0CG08 455 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 ACP5P13686 325 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 CBLP22681 906 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 SLC19A1P41440 591 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 IDH2P48735 452 aaKnown RBP13.84□□□□□ -0.19
TPM3-206ENST00000330188 TEKQ02763 1124 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 KCNC4Q03721 635 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 HSPB3Q12988 150 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 NR1D2Q14995 579 aa13.84□□□□□ -0.19
TPM3-206ENST00000330188 KIAA1161Q6NSJ0 714 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms