RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 OR5AK3PQ8NH89 298 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ASB11Q8WXH4 323 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ARPC5LQ9BPX5 153 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 HDHD5Q9BXW7 423 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 RACGAP1Q9H0H5 632 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 ANKRA2Q9H9E1 313 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 DIABLOQ9NR28 239 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 MCUBQ9NWR8 336 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 COMMD3Q9UBI1 195 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 RPL36Q9Y3U8 105 aaKnown RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 SLC9A3P48764 834 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 HMGA2P52926 109 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 BCL2L1Q07817 233 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CREB3L2Q70SY1 520 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 TSPAN33Q86UF1 283 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 Q8N402 240 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 GPR26Q8NDV2 337 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 PROKR2Q8NFJ6 384 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 TSSK6Q9BXA6 273 aa17.09■□□□□ 0.33
PRKCB-202ENST00000321728 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-202ENST00000321728 CCDC88CQ9P219 2028 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 SERTM1A2A2V5 107 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 LGI1O95970 557 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 IFNW1P05000 195 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 NUDT1P36639 197 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 PFN3P60673 137 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 SNRPGP62308 76 aaKnown RBP17.08■□□□□ 0.33
PRKCB-202ENST00000321728 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.33
PRKCB-202ENST00000321728 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 ESCO2Q56NI9 601 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 SDE2Q6IQ49 451 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 MZT2BQ6NZ67 158 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 HSDL2Q6YN16 418 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 WDR53Q7Z5U6 358 aaPredicted RBP17.08■□□□□ 0.33
PRKCB-202ENST00000321728 BPHLQ86WA6 291 aaPredicted RBP17.08■□□□□ 0.33
PRKCB-202ENST00000321728 TMC8Q8IU68 726 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 TCEANCQ8N8B7 351 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 WDR20Q8TBZ3 569 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 C1GALT1C1Q96EU7 318 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 TMEM121BQ9BXQ6 578 aaPredicted RBP17.08■□□□□ 0.33
PRKCB-202ENST00000321728 MCOLN1Q9GZU1 580 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 FZD3Q9NPG1 666 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 FAM8A1Q9UBU6 413 aa17.08■□□□□ 0.33
PRKCB-202ENST00000321728 TRBV4-1A0A0J9YWV2 114 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 E7EQ34 232 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 C6orf47O95873 294 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 IFNA14P01570 189 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 RHCEP18577 417 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 CHI3L1P36222 383 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 GSTM5P46439 218 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 TUFMP49411 452 aaKnown RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 CAV3P56539 151 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 C21orf58P58505 322 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 MRPL28Q13084 256 aaKnown RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 DOC2AQ14183 400 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 LIPJQ5W064 366 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 OMA1Q96E52 524 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 KCTD7Q96MP8 289 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 SGK2Q9HBY8 427 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 RBFOX1Q9NWB1 397 aaKnown RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 KCNN3Q9UGI6 736 aa17.08■□□□□ 0.32
PRKCB-202ENST00000321728 YARS2Q9Y2Z4 477 aaKnown RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 SPIN1Q9Y657 262 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-202ENST00000321728 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 PRKAR1AP10644 381 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 AKR1A1P14550 325 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 AP1S1P61966 158 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 ZNF385BQ569K4 471 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 ADGRF1Q5T601 910 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 TPGS1Q6ZTW0 290 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 PDZD3Q86UT5 571 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 ZBED6CLQ96FA7 236 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 GPR62Q9BZJ7 368 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 NARFLQ9H6Q4 476 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 ZDHHC3Q9NYG2 299 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 MBD1Q9UIS9 605 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 RNASET2O00584 256 aaKnown RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 TRIM3O75382 744 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-202ENST00000321728 STC2O76061 302 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 OR56A5P0C7T3 313 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 OSMP13725 252 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 M6PRP20645 277 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 CTGFP29279 349 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 B4GALNT1Q00973 533 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 RBBP4Q09028 425 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 LAMTOR1Q6IAA8 161 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 SYT14Q8NB59 555 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 OR52N2Q8NGI0 321 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 AP3S1Q92572 193 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 MTERF3Q96E29 417 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 MED8Q96G25 268 aa17.07■□□□□ 0.32
PRKCB-202ENST00000321728 MAGEB10Q96LZ2 347 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms