RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 LCTP09848 1927 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 B4DXG7 233 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 TP53P04637 393 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 CXCR4P61073 352 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 NCF4Q15080 339 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 SMARCD3Q6STE5 483 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 CHMP1BQ7LBR1 199 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 NPAS3Q8IXF0 933 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 EXOSC8Q96B26 276 aaKnown RBP13.59□□□□□ -0.23
PABPC1-201ENST00000318607 NARFLQ9H6Q4 476 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 EQTNQ9NQ60 294 aa13.59□□□□□ -0.23
PABPC1-201ENST00000318607 A0A0G2JMP0 313 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 A0A0U1RQF3 1178 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PRRG1O14668 218 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 KLK8O60259 260 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HRGP04196 525 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CSF3P09919 207 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF865P0CJ78 1059 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 EVI2BP34910 448 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SOX18P35713 384 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 RPS25P62851 125 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 GPR50Q13585 617 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 EFR3AQ14156 821 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 TUBA3EQ6PEY2 450 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CNIH2Q6PI25 160 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SMAP2Q8WU79 429 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PDLIM5Q96HC4 596 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 LRR1Q96L50 414 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HHATLQ9HCP6 504 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PCDHB11Q9Y5F2 797 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 POM121CA8CG34 1229 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 M0R3H8 397 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CSO75390 466 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 IFNW1P05000 195 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 MYL12AP19105 171 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HMGCLP35914 325 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 BUD31P41223 144 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 FADDQ13158 208 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF385BQ569K4 471 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PLAG1Q6DJT9 500 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CALHM3Q86XJ0 350 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 REPS1Q96D71 796 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 C7orf34Q96L11 122 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 OPALINQ96PE5 141 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SLC23A1Q9UHI7 598 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 RANBP2P49792 3224 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PLK4O00444 970 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 DVL2O14641 736 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SMAD9O15198 467 aaKnown RBP13.58□□□□□ -0.24
PABPC1-201ENST00000318607 KDELR3O43731 214 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 TSPAN9O75954 239 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 DRD5P21918 477 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PTPN6P29350 595 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CD79BP40259 229 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 NNMTP40261 264 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 XKP51811 444 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CRYBA2P53672 197 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CRISP1P54107 249 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 KCNA10Q16322 511 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HECTD3Q5T447 861 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 FRMPD2BQ6IN97 320 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 Q6ZVL8 140 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 CCDC190Q86UF4 302 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 LAPTM4BQ86VI4 370 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 IL17FQ96PD4 163 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 SAP130Q9H0E3 1048 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 PCDHB1Q9Y5F3 818 aa13.58□□□□□ -0.24
PABPC1-201ENST00000318607 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
PABPC1-201ENST00000318607 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 CLDN11O75508 207 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 TPPPO94811 219 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ASGR1P07306 291 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF250P15622 560 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 GZMMP51124 257 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 SELENOWP63302 87 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 MICAQ29983 383 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 TTC23LQ6PF05 361 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 CEACAM20Q6UY09 585 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 PEX5LQ8IYB4 626 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF566Q969W8 418 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 PPCDCQ96CD2 204 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 NELL2Q99435 816 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 POFUT2Q9Y2G5 429 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 A0A0B4J293 547 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 CAPN5O15484 640 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-201ENST00000318607 SLC16A8O95907 504 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ANXA8P13928 327 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms