RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TMEM80Q96HE8 168 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TSSK6Q9BXA6 273 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CDCP1Q9H5V8 836 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 C12orf4Q9NQ89 552 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FAM120CQ9NX05 1096 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TVP23BQ9NYZ1 205 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 VPS29Q9UBQ0 182 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 MAPRE3Q9UPY8 281 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 OTOFQ9HC10 1997 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 KCNE1BA0A087WTH5 132 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 IQCMA0A1B0GVH7 501 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FADS2P1A8MWK0 482 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FABP7O15540 132 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 OR10H3O60404 316 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ACSL4O60488 711 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 GJB5O95377 273 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ARSBP15848 533 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 MYL12AP19105 171 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CD22P20273 847 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 AOAHP28039 575 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CCR7P32248 378 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 AVPR1BP47901 424 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 RPS25P62851 125 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 HBA1P69905 142 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 INSL4Q14641 139 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CXCL17Q6UXB2 119 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 RFLNAQ6ZTI6 216 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ASB18Q6ZVZ8 466 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 HJURPQ8NCD3 748 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 PMEPA1Q969W9 287 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CIDECQ96AQ7 238 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 P2RY13Q9BPV8 354 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 SLC35A5Q9BS91 424 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 ANKRA2Q9H9E1 313 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 GLTPQ9NZD2 209 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 CNOT2Q9NZN8 540 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 FTSJ1Q9UET6 329 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 LSM2Q9Y333 95 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 PRRC2BQ5JSZ5 2229 aaKnown RBP9.23□□□□□ -0.93
PTPRA-202ENST00000318266 PTPRDP23468 1912 aa9.23□□□□□ -0.93
PTPRA-202ENST00000318266 GLYATL1P3A0A0U1RQE8 302 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TRBC2A0A5B9 178 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 C2orf78A6NCI8 922 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MYADML2A6NDP7 307 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ZAR1LA6NP61 321 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 H7C0S8 307 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TSPAN4O14817 238 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 LYRM1O43325 122 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TLX2O43763 284 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 C6orf47O95873 294 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ACRV1P26436 265 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PCGF2P35227 344 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 THPOP40225 353 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RPS26P62854 115 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MC1RQ01726 317 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MAB21L1Q13394 359 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CTXN3Q4LDR2 81 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RPS26P11Q5JNZ5 115 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TOR1AIP1Q5JTV8 583 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ANKRD54Q6NXT1 300 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CDH24Q86UP0 819 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 FBXL6Q8N531 539 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GDPD1Q8N9F7 314 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 VPS37AQ8NEZ2 397 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GATAD2BQ8WXI9 593 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SLC6A18Q96N87 628 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 WDFY2Q96P53 400 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PIP5K1AQ99755 562 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MND1Q9BWT6 205 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 AP5M1Q9H0R1 490 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 KLHL21Q9UJP4 597 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF222Q9UK12 451 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 POLHQ9Y253 713 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CASKO14936 926 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SCAMP2O15127 329 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TSPAN9O75954 239 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 OR7A10O76100 309 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 IGHA2P01877 340 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 BPIP17213 487 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CTBP2P56545 445 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RRAS2P62070 204 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RHAGQ02094 409 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 BCL2L1Q07817 233 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RBBP4Q09028 425 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ABRQ12979 859 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SNAPC1Q16533 368 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF385BQ569K4 471 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 IER5LQ5T953 404 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 FAM109BQ6ICB4 259 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CASP12Q6UXS9 341 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 IDO2Q6ZQW0 420 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF767PQ75MW2 155 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GPR155Q7Z3F1 870 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 HMGN2P46Q86SG4 172 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms