RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CYP4F8P98187 520 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 RGS1Q08116 209 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 RBBP4Q09028 425 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
ZNF558-201ENST00000301475 NPAS3Q8IXF0 933 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 L3MBTL4Q8NA19 623 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 ZNF680Q8NEM1 530 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 PROKR2Q8NFJ6 384 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 NFKBIDQ8NI38 313 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 NPLOC4Q8TAT6 608 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 FBXO32Q969P5 355 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SUSD3Q96L08 255 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 GPR137Q96N19 417 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SAMD11Q96NU1 681 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 SOSTQ9BQB4 213 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 TINF2Q9BSI4 451 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 FBXO44Q9H4M3 255 aa10.4□□□□□ -0.74
ZNF558-201ENST00000301475 GTPBP1O00178 669 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 B4GALT3O60512 393 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 PRMT3O60678 531 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SLC43A1O75387 559 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 CD22P20273 847 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 AOAHP28039 575 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SGSHP51688 502 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 BEX3Q00994 111 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 NFATC2Q13469 925 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 CCL14Q16627 93 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 MEDAGQ5VYS4 303 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TEX261Q6UWH6 196 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF730Q6ZMV8 503 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 OR8H3Q8N146 312 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SLC37A3Q8NCC5 494 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 MTERF1Q99551 399 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TSSK6Q9BXA6 273 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SLC22A14Q9Y267 594 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 U3KQ87 197 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TRBV4-1A0A0J9YWV2 114 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 C17orf102A2RUQ5 167 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 HPGDSO60760 199 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 CD160O95971 181 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 PRKAR1AP10644 381 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 STK19P49842 368 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 HMGA2P52926 109 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SNRPGP62308 76 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TAF10Q12962 218 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 DDX39BQ13838 428 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM201Q5SNT2 666 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ADNP2Q6IQ32 1131 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF782Q6ZMW2 699 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 LRRC70Q7Z2Q7 622 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 CELF5Q8N6W0 485 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TM9SF4Q92544 642 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 AKAP1Q92667 903 aaKnown RBP eCLIP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 REV1Q9UBZ9 1251 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ACSL6Q9UKU0 697 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ABT1Q9ULW3 272 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 AP1M2Q9Y6Q5 423 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 HEPACAM2A8MVW5 462 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ISM1B1AKI9 464 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ORC5O43913 435 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 RFPL3O75679 317 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 OPRD1P41143 372 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 MRPL28Q13084 256 aaKnown RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SNTA1Q13424 505 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SCARB2Q14108 478 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 LRRC32Q14392 662 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ZNF267Q14586 743 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 NCF4Q15080 339 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ATAT1Q5SQI0 421 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ATXN7L2Q5T6C5 722 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 MZT2BQ6NZ67 158 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 USP30Q70CQ3 517 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 KCTD20Q7Z5Y7 419 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 PLEKHH3Q7Z736 793 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TLK2Q86UE8 772 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 ATAD1Q8NBU5 361 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 MSANTD3Q96H12 275 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 KCTD7Q96MP8 289 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 KCNJ15Q99712 375 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TM9SF2Q99805 663 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 TMEM43Q9BTV4 400 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 HEXA-AS1Q9H8Q6 139 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
ZNF558-201ENST00000301475 SPIN1Q9Y657 262 aaPredicted RBP10.39□□□□□ -0.75
ZNF558-201ENST00000301475 KIAA1671Q9BY89 1806 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 RPS10-NUDT3A0A1W2PQS6 291 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 C2orf78A6NCI8 922 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 INMT-MINDY4F8WBC2 141 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 QSOX1O00391 747 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 FFAR1O14842 300 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 TSPAN9O75954 239 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 ETHE1O95571 254 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 ACRV1P26436 265 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 ETV5P41161 510 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 SLC6A12P48065 614 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 ETV1P50549 477 aa10.38□□□□□ -0.75
ZNF558-201ENST00000301475 ARF5P84085 180 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms