RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DISC1C4P0D8 188 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GTF2F2P13984 249 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 EMX2Q04743 252 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DCUN1D3Q8IWE4 304 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NUP43Q8NFH3 380 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM120CQ9NX05 1096 aaKnown RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 K7ERQ8 282 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PIGRP01833 764 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CD9P21926 228 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GPR4P46093 362 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TAS2R10Q9NYW0 307 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 EXTL2Q9UBQ6 330 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NUFIP1Q9UHK0 495 aaKnown RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TOXO94900 526 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PVALBP20472 110 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HSD3B2P26439 372 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NR4A2P43354 598 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SRYQ05066 204 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GRIK2Q13002 908 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMEM151AQ8N4L1 468 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR13C3Q8NGS6 347 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ABHD5Q8WTS1 349 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TRIB2Q92519 343 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OSTF1Q92882 214 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GPR88Q9GZN0 384 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RTCAO00442 366 aaKnown RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MT-ND5P03915 603 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UQCRC2P22695 453 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACRV1P26436 265 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ITPRIPL2Q3MIP1 535 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UBE2UQ5VVX9 321 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PTCHD1Q96NR3 888 aa13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TNFSF12O43508 249 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SDC3O75056 442 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TNFRSF1BP20333 461 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CD72P21854 359 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MTFR2Q6P444 385 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR4K14Q8NGD5 310 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TBC1D15Q8TC07 691 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 F2RL3Q96RI0 385 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PADI2Q9Y2J8 665 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NPIPA2E9PIF3 369 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NPIPA3F8WFD2 350 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HTRA2O43464 458 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GALTP07902 379 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 YES1P07947 543 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SRPRAP08240 638 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 REEP3Q6NUK4 255 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF572Q7Z3I7 529 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KLHDC7BQ96G42 594 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C7orf34Q96L11 122 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF317Q96PQ6 595 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 STRA6Q9BX79 667 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TRIM64BA6NI03 449 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF821O75541 412 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DEFB134Q4QY38 66 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C22orf42Q6IC83 251 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FCAMRQ8WWV6 532 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAN2C1Q9NTJ4 1040 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 A0A0G2JPF8 293 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PRSS51A0A1B0GVH4 220 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ISPDA4D126 451 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IGLON5A6NGN9 336 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HNRNPCL3B7ZW38 293 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ASGR2P07307 311 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HNRNPCL4P0DMR1 293 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RBM39Q14498 530 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CDK10Q15131 360 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FIP1L1Q6UN15 594 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZSCAN4Q8NAM6 433 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DNAAF1Q8NEP3 725 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MRGPRX2Q96LB1 330 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GPR174Q9BXC1 333 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CNOT4O95628 575 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ADH1BP00325 375 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAS1P04201 325 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CD1DP15813 335 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CELP19835 753 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CFL1P23528 166 aaKnown RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LCN1P31025 176 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms