RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RPS26P11Q5JNZ5 115 aaPredicted RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PIP5KL1Q5T9C9 394 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PNCKQ6P2M8 343 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 DSG4Q86SJ6 1040 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 TMCO5AQ8N6Q1 288 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ANKRD53Q8N9V6 530 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 TRUB1Q8WWH5 349 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 GEMIN6Q8WXD5 167 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 NLNQ9BYT8 704 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ABCG4Q9H172 646 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 THSD1Q9NS62 852 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 FAIMQ9NVQ4 179 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 SH3GLB1Q9Y371 365 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 TRBC2A0A5B9 178 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 M0R129 80 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 FUT4P22083 530 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 UQCRC2P22695 453 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ACVR2AP27037 513 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 IDH2P48735 452 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 NUDT6P53370 316 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 NCS1P62166 190 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 MVKQ03426 396 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 OCA2Q04671 838 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 MICAQ29983 383 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 KHDRBS2Q5VWX1 349 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 TNFAIP8L2Q6P589 184 aaPredicted RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 AIF1LQ9BQI0 150 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 MS4A8Q9BY19 250 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 EPS8L2Q9H6S3 715 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PELI2Q9HAT8 420 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 SLAMF7Q9NQ25 335 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 AHSPQ9NZD4 102 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 SELENONQ9NZV5 590 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 C5AR2Q9P296 337 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 RHCGQ9UBD6 479 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 DPP7Q9UHL4 492 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PCDHGA2Q9Y5H1 932 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 DOCK9Q9BZ29 2069 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 TECTAO75443 2155 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 TRPM6Q9BX84 2022 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 OR2A25A4D2G3 310 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 M0R3G1 203 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 SLC22A1O15245 554 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 IFNA14P01570 189 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 POU2F2P09086 479 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 POU2F1P14859 743 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 ITGA2P17301 1181 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 DDCP20711 480 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 IDUAP35475 653 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 XCR1P46094 333 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 PCBP3P57721 371 aaKnown RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 RPA4Q13156 261 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 ELOAQ14241 798 aaKnown RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 TMEM236Q5W0B7 351 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 EGFLAMQ63HQ2 1017 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 CEACAM20Q6UY09 585 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 SLC44A2Q8IWA5 706 aaPredicted RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 OR5K2Q8NHB8 316 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 UTP15Q8TED0 518 aaKnown RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 PROX1Q92786 737 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 FGF13Q92913 245 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 PIP5K1AQ99755 562 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 BCL7BQ9BQE9 202 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 ZNF717Q9BY31 904 aaPredicted RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 ALOXE3Q9BYJ1 711 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 AMBNQ9NP70 447 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 MUTYHQ9UIF7 546 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
CPSF6-201ENST00000266679 TSC22D4Q9Y3Q8 395 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 NUMA1Q14980 2115 aa12.28□□□□□ -0.44
CPSF6-201ENST00000266679 PCDH17O14917 1159 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 MID1O15344 667 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 PDPK1O15530 556 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 SH3BP5O60239 455 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 PCDH8O95206 1070 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 NADKO95544 446 aaPredicted RBP12.27□□□□□ -0.44
CPSF6-201ENST00000266679 ERGP11308 486 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 ANXA8P13928 327 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 TGFBR1P36897 503 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 OPRD1P41143 372 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 SLC19A1P41440 591 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 PSMD7P51665 324 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 REEP5Q00765 189 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 HSPB3Q12988 150 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 WSCD2Q2TBF2 565 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 DEPDC1Q5TB30 811 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 HORMAD2Q8N7B1 307 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 RPL3LQ92901 407 aaKnown RBP12.27□□□□□ -0.44
CPSF6-201ENST00000266679 SH3YL1Q96HL8 342 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms