RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MYOCOSA0A1B0GUC4 107 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 OR52A4PA6NMU1 304 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 E7EQ34 232 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 KHNYNO15037 678 aaKnown RBP14.77□□□□□ -0.04
TIMP3-201ENST00000266085 HHEXQ03014 270 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 NDUFA5Q16718 116 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 LETMD1Q6P1Q0 360 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 GALNT7Q86SF2 657 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 CARM1Q86X55 608 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 OR2AJ1Q8NGZ0 328 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 OR8K5Q8NH50 307 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.77□□□□□ -0.04
TIMP3-201ENST00000266085 DTD2Q96FN9 168 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 NLGN3Q9NZ94 848 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 COMMD3Q9UBI1 195 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 PRODH2Q9UF12 536 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF726A6NNF4 738 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 MUSKO15146 869 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 SDC3O75056 442 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 ABLIM3O94929 683 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 DRD2P14416 443 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 CTSCP53634 463 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 OR4D2P58180 307 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 CBX3Q13185 183 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 PUM1Q14671 1186 aaKnown RBP eCLIP14.77□□□□□ -0.04
TIMP3-201ENST00000266085 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.77□□□□□ -0.04
TIMP3-201ENST00000266085 PROKR2Q8NFJ6 384 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 SDR39U1Q9NRG7 319 aaPredicted RBP14.77□□□□□ -0.04
TIMP3-201ENST00000266085 TMEM5Q9Y2B1 443 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 IFT52Q9Y366 437 aa14.77□□□□□ -0.04
TIMP3-201ENST00000266085 ATXN1LP0C7T5 689 aaKnown RBP14.77□□□□□ -0.05
TIMP3-201ENST00000266085 CASRP41180 1078 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 CLDN2P57739 230 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 RPS15AP62244 130 aaKnown RBP14.77□□□□□ -0.05
TIMP3-201ENST00000266085 CD47Q08722 323 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 UTS2BQ765I0 119 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 C6orf120Q7Z4R8 191 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 KCTD7Q96MP8 289 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 KCNS3Q9BQ31 491 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.77□□□□□ -0.05
TIMP3-201ENST00000266085 FABP12A6NFH5 140 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 EMC8O43402 210 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 RNH1P13489 461 aaKnown RBP14.77□□□□□ -0.05
TIMP3-201ENST00000266085 S100GP29377 79 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 E2F2Q14209 437 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 CYP27C1Q4G0S4 372 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 COLEC12Q5KU26 742 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 NUP43Q8NFH3 380 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 OR4K17Q8NGC6 315 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 SLC35C2Q9NQQ7 365 aa14.77□□□□□ -0.05
TIMP3-201ENST00000266085 ZNF821O75541 412 aaPredicted RBP14.76□□□□□ -0.05
TIMP3-201ENST00000266085 AHSA1O95433 338 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 MYOGP15173 224 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 RORCP51449 518 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 TUBA4AP68366 448 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 SLC14A2Q15849 920 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 SGCBQ16585 318 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 TANGO2Q6ICL3 276 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 TCEANCQ8N8B7 351 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 GOLM1Q8NBJ4 401 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 RMI1Q9H9A7 625 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 HEBP1Q9NRV9 189 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 MYO10Q9HD67 2058 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 APBB3O95704 486 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 IL1RNP18510 177 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 RABIFP47224 123 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 CSNK1DP48730 415 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 AP3S2P59780 193 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 VLDLRP98155 873 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 FLYWCH1Q4VC44 716 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 DUS1LQ6P1R4 473 aaKnown RBP14.76□□□□□ -0.05
TIMP3-201ENST00000266085 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 COMMD6Q7Z4G1 85 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 ACVR1CQ8NER5 493 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 OR7G3Q8NG95 312 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 PIK3R3Q92569 461 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 APOOQ9BUR5 198 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 BHLHE41Q9C0J9 482 aaPredicted RBP14.76□□□□□ -0.05
TIMP3-201ENST00000266085 DCSTAMPQ9H295 470 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 PEX12O00623 359 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 ACOX3O15254 700 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 DUX1O43812 170 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 ZNF33BQ06732 778 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 MBTPS1Q14703 1052 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 DNM1P34Q6PK57 102 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 ARL9Q6T311 187 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 DOK4Q8TEW6 326 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 TMEM203Q969S6 136 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 SH3YL1Q96HL8 342 aaPredicted RBP14.76□□□□□ -0.05
TIMP3-201ENST00000266085 ITPAQ9BY32 194 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 MARK1Q9P0L2 795 aa14.76□□□□□ -0.05
TIMP3-201ENST00000266085 OR2B3O76000 313 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 KLHL18O94889 574 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 INMTO95050 263 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 JMJD7P0C870 316 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 IRS1P35568 1242 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 GMFBP60983 142 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 LHX8Q68G74 356 aa14.75□□□□□ -0.05
TIMP3-201ENST00000266085 CWF19L1Q69YN2 538 aaKnown RBP14.75□□□□□ -0.05
TIMP3-201ENST00000266085 OR52E8Q6IFG1 317 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms