RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HCN4Q9Y3Q4 1203 aa16.03■□□□□ 0.16
SQLE-201ENST00000265896 WNT6Q9Y6F9 365 aa16.03■□□□□ 0.16
SQLE-201ENST00000265896 FRS3O43559 492 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 RECKO95980 971 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 AP1S2P56377 157 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 RAB25P57735 213 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 HOXC5Q00444 222 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 ZNF763Q0D2J5 394 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 C22orf42Q6IC83 251 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 B3GLCTQ6Y288 498 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 ZNF783Q6ZMS7 281 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 ATCAYQ86WG3 371 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 HORMAD2Q8N7B1 307 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 FIBINQ8TAL6 211 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 C16orf78Q8WTQ4 265 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 COQ8BQ96D53 544 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 TXNDC15Q96J42 360 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 PIP5K1AQ99755 562 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 POLR2J2Q9GZM3 115 aaKnown RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 MVB12BQ9H7P6 319 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 HHATLQ9HCP6 504 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 CDRT1O95170 752 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 POP4O95707 220 aaKnown RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 NPPBP16860 134 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 PSMB5P28074 263 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 CD83Q01151 205 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 SP3Q02447 781 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 MLLT1Q03111 559 aaPredicted RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 TARDBPQ13148 414 aaKnown RBP eCLIP16.02■□□□□ 0.16
SQLE-201ENST00000265896 TMC5Q6UXY8 1006 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 SLCO4C1Q6ZQN7 724 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 COMTD1Q86VU5 262 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 C11orf24Q96F05 449 aaPredicted RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 TM9SF2Q99805 663 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 MRPL9Q9BYD2 267 aaKnown RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 SP140LQ9H930 580 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 WBP11Q9Y2W2 641 aaKnown RBP16.02■□□□□ 0.16
SQLE-201ENST00000265896 TMEM98Q9Y2Y6 226 aa16.02■□□□□ 0.16
SQLE-201ENST00000265896 HELZP42694 1942 aaKnown RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 PLXND1Q9Y4D7 1925 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 IGLV3-16A0A075B6K0 115 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 SYNDIG1LA6NDD5 238 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 CCRL2O00421 344 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 CYP17A1P05093 508 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 ANXA8P13928 327 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 ZNF24P17028 368 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 CRISP1P54107 249 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 MAP4K2Q12851 820 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 NFE2L1Q14494 772 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 CCDC85BQ15834 202 aaPredicted RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 GRHL2Q6ISB3 625 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 VASH1Q7L8A9 365 aaPredicted RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 MINDY2Q8NBR6 621 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 NLGN4YQ8NFZ3 816 aaPredicted RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 F2RL3Q96RI0 385 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 MCCC1Q96RQ3 725 aaPredicted RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 ZNF282Q9UDV7 671 aaPredicted RBP16.02■□□□□ 0.15
SQLE-201ENST00000265896 SLC25A13Q9UJS0 675 aa16.02■□□□□ 0.15
SQLE-201ENST00000265896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.01■□□□□ 0.15
SQLE-201ENST00000265896 A0A1W2PQ09 198 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 PIPSLA2A3N6 862 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.01■□□□□ 0.15
SQLE-201ENST00000265896 TAF4O00268 1085 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 CH25HO95992 272 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 IFNW1P05000 195 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 GSTM1P09488 218 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 FURINP09958 794 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 PRPH2P23942 346 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 NTHL1P78549 312 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 DEFB103AP81534 67 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 SPDYE7PQ495Y7 208 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 CLEC12AQ5QGZ9 265 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 PLEKHS1Q5SXH7 462 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 PAMR1Q6UXH9 720 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 OVCA2Q8WZ82 227 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 OTULINQ96BN8 352 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 ECHDC3Q96DC8 303 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 SMURF1Q9HCE7 757 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 CLN6Q9NWW5 311 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 NUFIP1Q9UHK0 495 aaKnown RBP16.01■□□□□ 0.15
SQLE-201ENST00000265896 STOML2Q9UJZ1 356 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 C5orf58C9J3I9 102 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 TLR4O00206 839 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 NPC1O15118 1278 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 TGM5O43548 720 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 LATO43561 262 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 GUCY1B2O75343 617 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 CSO75390 466 aaKnown RBP16.01■□□□□ 0.15
SQLE-201ENST00000265896 KLHL18O94889 574 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 SOD2P04179 222 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 HBQ1P09105 142 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 ZNF284Q2VY69 593 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 ANXA8L1Q5VT79 327 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 AMER3Q8N944 861 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 DOK4Q8TEW6 326 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 XAGE5Q8WWM1 108 aa16.01■□□□□ 0.15
SQLE-201ENST00000265896 ING5Q8WYH8 240 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms