RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 OR4C15Q8NGM1 316 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PIP5K1AQ99755 562 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 ASPNQ9BXN1 380 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 C1GALT1Q9NS00 363 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 HCN4Q9Y3Q4 1203 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PCM1Q15154 2024 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 EFCAB10A6NFE3 127 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PDZK1P1A8MUH7 402 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 H0YIV9 168 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 M0R3H8 397 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 NPC1O15118 1278 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 LATO43561 262 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 SEMA7AO75326 666 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PSIP1O75475 530 aaKnown RBP8.71□□□□□ -1.02
MSH4-201ENST00000263187 SNX4O95219 450 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 IFNW1P05000 195 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 FURINP09958 794 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 ANXA8P13928 327 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 SOX6P35712 828 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 BMPR1AP36894 532 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
MSH4-201ENST00000263187 POLR2LP62875 67 aaKnown RBP8.71□□□□□ -1.02
MSH4-201ENST00000263187 TUBA1BP68363 451 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TARDBPQ13148 414 aaKnown RBP eCLIP8.71□□□□□ -1.02
MSH4-201ENST00000263187 RAB33AQ14088 237 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TEAD4Q15561 434 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TEAD2Q15562 447 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 RAET1GQ6H3X3 334 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TUBA1AQ71U36 451 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 ADCK2Q7Z695 626 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 ABI3BPQ7Z7G0 1075 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 LACC1Q8IV20 430 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 CHCHD4Q8N4Q1 142 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 SCAIQ8N9R8 606 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 BTN2A2Q8WVV5 523 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GLYATL1Q969I3 302 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 NECTIN4Q96NY8 510 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TTYH2Q9BSA4 534 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 QRSL1Q9H0R6 528 aaKnown RBP8.71□□□□□ -1.02
MSH4-201ENST00000263187 ANKRA2Q9H9E1 313 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 SLAMF7Q9NQ25 335 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TM7SF3Q9NS93 570 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 BTNL2Q9UIR0 455 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 HS3ST2Q9Y278 367 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GPR52Q9Y2T5 361 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 DYRK1BQ9Y463 629 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GON4LQ3T8J9 2241 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 CHD9Q3L8U1 2897 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 KIAA0100Q14667 2235 aaKnown RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 TRIOO75962 3097 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TTC36A6NLP5 189 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 WASH3PC4AMC7 463 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 HAT1O14929 419 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TLX2O43763 284 aaPredicted RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 ARHGEF15O94989 841 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 VIPR1P32241 457 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 CRISP1P54107 249 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 MANFP55145 182 aaKnown RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 OR2B6P58173 313 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 BAK1Q16611 211 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SPIN4Q56A73 249 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 FRMPD2BQ6IN97 320 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ADIPOR2Q86V24 386 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SFTPA1Q8IWL2 248 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 OR9Q1Q8NGQ5 310 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 XAGE5Q8WWM1 108 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ITPKCQ96DU7 683 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 C11orf24Q96F05 449 aaPredicted RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 BARHL1Q9BZE3 327 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 NEK6Q9HC98 313 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 CLN6Q9NWW5 311 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 FBXL12Q9NXK8 326 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TAS2R9Q9NYW1 312 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TBC1D14Q9P2M4 693 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TRPC4Q9UBN4 977 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 IL20RAQ9UHF4 553 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ASF1AQ9Y294 204 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SYNDIG1LA6NDD5 238 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 PLD2O14939 933 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 FRS3O43559 492 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 MMP20O60882 483 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 FKTNO75072 461 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 KLHL18O94889 574 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 AP2A2O94973 939 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 C1orf105O95561 183 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 APOA1P02647 267 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 KRT8P05787 483 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 GABRB1P18505 474 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 SLC15A1P46059 708 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 IFITM2Q01629 132 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 UBE3AQ05086 875 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 MAP4K2Q12851 820 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ZNF181Q2M3W8 571 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 ARMC4Q5T2S8 1044 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 METTL2BQ6P1Q9 378 aaKnown RBP8.7□□□□□ -1.02
MSH4-201ENST00000263187 PNCKQ6P2M8 343 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TRIM40Q6P9F5 258 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TRIM48Q8IWZ4 208 aa8.7□□□□□ -1.02
MSH4-201ENST00000263187 TCEAL8Q8IYN2 117 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms