RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 FAM86B1Q8N7N1 296 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 NUP43Q8NFH3 380 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 EDAQ92838 391 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ECHDC3Q96DC8 303 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 SRA1Q9HD15 236 aaKnown RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 APOC1P02654 83 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 HERC3Q15034 1050 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 TNFRSF25Q93038 417 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 RAB7BQ96AH8 199 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 TRIM43Q96BQ3 446 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 TAMM41Q96BW9 452 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ZNF599Q96NL3 588 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 COMMD3Q9UBI1 195 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 GJD2Q9UKL4 321 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 TRIM64CA6NLI5 447 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 RGS10O43665 173 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 SNHG28P0DPA3 235 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 TNFSF4P23510 183 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 LAPTM4BQ86VI4 370 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 LRTOMTQ8WZ04 291 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ARRDC1-AS1Q9H2J1 176 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ACSS3Q9H6R3 686 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 DLGAP4Q9Y2H0 992 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 PLLPQ9Y342 182 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ROBO3Q96MS0 1386 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 A0A0U1RQS6 177 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 BCKDHAP12694 445 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 NR2C1P13056 603 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 ZNF234Q14588 700 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 SMG8Q8ND04 991 aaKnown RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 OR4F6Q8NGB9 312 aa15.23■□□□□ 0.03
SHANK3-201ENST00000262795 RBM4BQ9BQ04 359 aaKnown RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 RBM4Q9BWF3 364 aaKnown RBP15.23■□□□□ 0.03
SHANK3-201ENST00000262795 BBIP1A8MTZ0 92 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 GPR32O75388 356 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 TPPPO94811 219 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 EMP2P54851 167 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ACY1Q03154 408 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 LIPIQ6XZB0 460 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 SLC5A8Q8N695 610 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 IGSF8Q969P0 613 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CDH22Q9UJ99 828 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 PLSCR5A0PG75 271 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 FTCDNL1E5RQL4 147 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 PRAMEF26H0Y7S4 382 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ADAMDEC1O15204 470 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 APOL3O95236 402 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CD46P15529 392 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 SOX2P48431 317 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 SYT16Q17RD7 645 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 UBE2UQ5VVX9 321 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 LRFN4Q6PJG9 635 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 TSSK4Q6SA08 328 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 OR13C3Q8NGS6 347 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ALG3Q92685 438 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ZIC5Q96T25 663 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CWH43Q9H720 699 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 NSG1A0A0A6YYJ2 146 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 TEX13DA0A0J9YY54 714 aaPredicted RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 DPP4P27487 766 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 AGTR2P50052 363 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 GTF2IRD2BQ6EKJ0 949 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 DCDC5Q6ZRR9 648 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 GTF2IRD2Q86UP8 949 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 EGFL6Q8IUX8 553 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 GPALPP1Q8IXQ4 340 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 GALPQ9UBC7 116 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 RABL2AQ9UBK7 228 aaPredicted RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 NUFIP1Q9UHK0 495 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 A0A1W2PPK0 400 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 RALGPS1Q5JS13 557 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 NANOS1Q8WY41 292 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 PELOQ9BRX2 385 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 C14orf105Q9NVL8 296 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ZNF225Q9UK10 706 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CARD8Q9Y2G2 431 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 SLC7A4O43246 635 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 TNFSF12O43508 249 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 BEST1O76090 585 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CYBAP13498 195 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 RUNX2Q13950 521 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 LIN52Q52LA3 116 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 KLHDC10Q6PID8 442 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 UNQ6126/PRO20091Q6UXV3 157 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 SERINC5Q86VE9 423 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 BBS10Q8TAM1 723 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CREB3L4Q8TEY5 395 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 G6PC3Q9BUM1 346 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 NKX1-2Q9UD57 310 aaPredicted RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 C14orf166Q9Y224 244 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 CLIC1O00299 241 aa15.22■□□□□ 0.03
SHANK3-201ENST00000262795 ENSAO43768 121 aaKnown RBP15.22■□□□□ 0.03
SHANK3-201ENST00000262795 PPP1R8Q12972 351 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms