RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 STX3Q13277 289 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 KCNAB2Q13303 367 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 SH2D4BQ5SQS7 431 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 ANKRD37Q7Z713 158 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 MGARPQ8TDB4 240 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 TANKQ92844 425 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 C8orf44Q96CB5 159 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 METTL2AQ96IZ6 378 aaKnown RBP17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 HBEGFQ99075 208 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 LPAR4Q99677 370 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 CCT7Q99832 543 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 SH3GL2Q99962 352 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 ZNF700Q9H0M5 742 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 KCMF1Q9P0J7 381 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 FIS1Q9Y3D6 152 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 TRAF6Q9Y4K3 522 aa17.63■□□□□ 0.41
CYSTM1-201ENST00000261811 IGHV1-45A0A0A0MS14 117 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 A0A0A6YYD5 115 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 CYR61O00622 381 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 SERPINB3P29508 390 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 FOXA1P55317 472 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ABCE1P61221 599 aaKnown RBP17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 TRA2BP62995 288 aaKnown RBP17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 TNFRSF17Q02223 184 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 SERTAD2Q14140 314 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 MPP2Q14168 576 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 LINC00303Q3SY05 128 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 KANK2Q63ZY3 851 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ATG16L1Q676U5 607 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 RNF165Q6ZSG1 346 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 COMMD6Q7Z4G1 85 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 TRIM46Q7Z4K8 759 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 KBTBD2Q8IY47 623 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 GALNT16Q8N428 558 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 RAB3IL1Q8TBN0 382 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ARL8AQ96BM9 186 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ACPTQ9BZG2 426 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ILKAPQ9H0C8 392 aaPredicted RBP17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 RPF2Q9H7B2 306 aaKnown RBP17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 ZNF160Q9HCG1 818 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 MLXIPLQ9NP71 852 aa17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.62■□□□□ 0.41
CYSTM1-201ENST00000261811 GNG14A0A1W2PPG7 69 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 ATXN7O15265 892 aaPredicted RBP17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 PROM1O43490 865 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 EEDO75530 441 aaKnown RBP17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 RSL1D1O76021 490 aaKnown RBP17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 ALPPP05187 535 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 CHRNGP07510 517 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 NR2F6P10588 404 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 COX6A1P12074 109 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 MAOAP21397 527 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 ITGA3P26006 1051 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 GSTM5P46439 218 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 SLC1A6P48664 564 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 HTR6P50406 440 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 BTG2P78543 158 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 EXT1Q16394 746 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 SFT2D3Q587I9 215 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 CPZQ66K79 652 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 RIPOR1Q6ZS17 1223 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 LANCL3Q6ZV70 420 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 C1orf52Q8N6N3 182 aaKnown RBP17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 OR6Y1Q8NGX8 325 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 CHTF18Q8WVB6 975 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 SLC25A23Q9BV35 468 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 FAIM2Q9BWQ8 316 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 ZNF717Q9BY31 904 aaPredicted RBP17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 GPR83Q9NYM4 423 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 MCM8Q9UJA3 840 aa17.61■□□□□ 0.41
CYSTM1-201ENST00000261811 TCRBV16S1A1N1A0A5B0 115 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 OR2W5A6NFC9 320 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 EIF4E1BA6NMX2 242 aaKnown RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 GBAP04062 536 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 FAM87AP0C7U9 286 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 BGNP21810 368 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 SOX8P57073 446 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 HMGCS1Q01581 520 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 BTKQ06187 659 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 TBL3Q12788 808 aaKnown RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 CHAF1BQ13112 559 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 MRM1Q6IN84 353 aaKnown RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 SCIMPQ6UWF3 145 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 TMEM151BQ8IW70 566 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 SCUBE1Q8IWY4 988 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 DDIASQ8IXT1 998 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 C9orf43Q8TAL5 461 aaPredicted RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 AGR3Q8TD06 166 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 TSLPQ969D9 159 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 CSF3RQ99062 836 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 LHPPQ9H008 270 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 PSME2Q9UL46 239 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 RAP2CQ9Y3L5 183 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 ATG4BQ9Y4P1 393 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 ASB4Q9Y574 426 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 PCDHGB7Q9Y5F8 929 aa17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 PCDHGA9Q9Y5G4 932 aaKnown RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 TNRC6AQ8NDV7 1962 aaKnown RBP17.6■□□□□ 0.41
CYSTM1-201ENST00000261811 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms