RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ACSS1Q9NUB1 689 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 SEC14L3Q9UDX4 400 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 C2orf92A0A1B0GVN3 265 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TCRBV16S1A1N1A0A5B0 115 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 LRRN3E7EW58 273 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CBX4O00257 560 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 AP2A1O95782 977 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 F10P00742 488 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PPBPP02775 128 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PEPDP12955 493 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 AGFG1P52594 562 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 RAB25P57735 213 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 AP3S2P59780 193 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 LSM11P83369 360 aaKnown RBP eCLIP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 KLF10Q13118 480 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 NOGQ13253 232 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FASTKQ14296 549 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CLINT1Q14677 625 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TAF1AQ15573 450 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TRIM60Q495X7 471 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FNBP1LQ5T0N5 605 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 MAP1SQ66K74 1059 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 RGS7BPQ6MZT1 257 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TMEM88Q6PEY1 159 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PAQR3Q6TCH7 311 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 METAP1DQ6UB28 335 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 C17orf47Q8NEP4 570 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 OR14A16Q8NHC5 309 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 SDR42E1Q8WUS8 393 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CLP1Q92989 425 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CCDC32Q9BV29 185 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 LRRN3Q9H3W5 708 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 TCF7L1Q9HCS4 588 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 FAM49BQ9NUQ9 324 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 DZANK1Q9NVP4 752 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 GSKIPQ9P0R6 139 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 OPTCQ9UBM4 332 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 KCNG2Q9UJ96 466 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 SLC27A6Q9Y2P4 619 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 CLDN16Q9Y5I7 305 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 MRPS18BQ9Y676 258 aaKnown RBP7.43□□□□□ -1.22
GPNMB-201ENST00000258733 NFAT5O94916 1531 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 MRC1P22897 1456 aa7.43□□□□□ -1.22
GPNMB-201ENST00000258733 PNMA8CA0A1B0GUJ8 204 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 TBC1D3FA6NER0 549 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 RNF13O43567 381 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SUPT7LO94864 414 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CRYGCP07315 174 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 PNLIPP16233 465 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 DPEP1P16444 411 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 FBLN1P23142 703 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CEACAM8P31997 349 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SLC1A2P43004 574 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 PRKXP51817 358 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CEBPGP53567 150 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 BCAT1P54687 386 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 LSM3P62310 102 aaKnown RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 C2orf80Q0P641 193 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SCGB2A2Q13296 93 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF630Q2M218 657 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 HSF5Q4G112 596 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 MISPQ8IVT2 679 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 PHYHIPQ92561 330 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 GAD1Q99259 594 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 RNF32Q9H0A6 362 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 AAASQ9NRG9 546 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 TMEM184CQ9NVA4 438 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 WIF1Q9Y5W5 379 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 BRWD3Q6RI45 1802 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 TCRBV21S2A2A0A5A6 115 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 DFFAO00273 331 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SIGLEC5O15389 551 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 HCN1O60741 890 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ICOSLGO75144 302 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF7P17097 686 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 BGNP21810 368 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 UBA1P22314 1058 aaKnown RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SSTR2P30874 369 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 LIMS1P48059 325 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 LIMK2P53671 638 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 MAXP61244 160 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 RAP1AP62834 184 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SLC7A9P82251 487 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 SIGLEC14Q08ET2 396 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 MAP4K2Q12851 820 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 ZNF155Q12901 538 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-201ENST00000258733 LCP2Q13094 533 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 GPM6BQ13491 265 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 KRT33BQ14525 404 aa7.42□□□□□ -1.22
GPNMB-201ENST00000258733 MTX3Q5HYI7 312 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms