RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 DNMT3AQ9Y6K1 912 aaPredicted RBP14.99□□□□□ -0.01
RFX1-201ENST00000254325 OR12D1P0DN82 309 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 OPRD1P41143 372 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 RAE1P78406 368 aaKnown RBP14.99□□□□□ -0.01
RFX1-201ENST00000254325 KCNC4Q03721 635 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 GRSF1Q12849 480 aaKnown RBP eCLIP14.99□□□□□ -0.01
RFX1-201ENST00000254325 FAM71E1Q6IPT2 247 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 TSPYL5Q86VY4 417 aaPredicted RBP14.99□□□□□ -0.01
RFX1-201ENST00000254325 SYNPOQ8N3V7 929 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 OR2M4Q96R27 311 aa14.99□□□□□ -0.01
RFX1-201ENST00000254325 C6orf62Q9GZU0 229 aaPredicted RBP14.99□□□□□ -0.01
RFX1-201ENST00000254325 KLHL33A6NCF5 533 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 UPK1AO00322 258 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SLC35G6P0C7Q6 338 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 DBTP11182 482 aaKnown RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 CTSEP14091 401 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CSNK2A2P19784 350 aaPredicted RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 ZNF10P21506 573 aaPredicted RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 KHKP50053 298 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CRISP3P54108 245 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CSNK2BP67870 215 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 PRR5P85299 388 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CAMK1Q14012 370 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 OR4C11Q6IEV9 310 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 HMGN2P46Q86SG4 172 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CCDC116Q8IYX3 515 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ADAMTS15Q8TE58 950 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 TMEM19Q96HH6 336 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ZNF300Q96RE9 604 aaPredicted RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 FUNDC2Q9BWH2 189 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 KLHL25Q9H0H3 589 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 VNN3Q9NY84 501 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ZNF639Q9UID6 485 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SEMA3DO95025 777 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 PBX2P40425 430 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SLAMF1Q13291 335 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 METRNLQ641Q3 311 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 OBP2AQ9NY56 170 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ITGAMP11215 1152 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 IL1RNP18510 177 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 BTN3A2P78410 334 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ILF3Q12906 894 aaKnown RBP eCLIP14.98□□□□□ -0.01
RFX1-201ENST00000254325 PIP5KL1Q5T9C9 394 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 RERGQ96A58 199 aaPredicted RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 BARD1Q99728 777 aaKnown RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 MVB12BQ9H7P6 319 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ZNF229Q9UJW7 825 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SNX7Q9UNH6 387 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ST14Q9Y5Y6 855 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 LRRC72A6NJI9 287 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CDK4P11802 303 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 CD36P16671 472 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 RYKP34925 604 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 FXNQ16595 210 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 NDUFAF5Q5TEU4 345 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 TRIM69Q86WT6 500 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SLC9A6Q92581 669 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 LINC00615Q96LM1 132 aaPredicted RBP14.98□□□□□ -0.01
RFX1-201ENST00000254325 IL4I1Q96RQ9 567 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 SLC6A17Q9H1V8 727 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 ETAA1Q9NY74 926 aa14.98□□□□□ -0.01
RFX1-201ENST00000254325 URADA6NGE7 173 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 ZNF701M0R085 212 aaPredicted RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 NME6O75414 186 aaPredicted RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 H1F0P07305 194 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 IGFBP4P22692 258 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 PTGER1P34995 402 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 NFATC3Q12968 1075 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 SHHQ15465 462 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 SMN1Q16637 294 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 PARM1Q6UWI2 310 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 OR9Q2Q8NGE9 314 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 CDCA3Q99618 268 aaPredicted RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 EPYCQ99645 322 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 DNAAF2Q9NVR5 837 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 A0A0J9YVX5 310 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 SERTM1A2A2V5 107 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 PLPP1O14494 284 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 JRKO75564 520 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 MATN1P21941 496 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 TAS2R41P59536 307 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 TARDBPQ13148 414 aaKnown RBP eCLIP14.97□□□□□ -0.01
RFX1-201ENST00000254325 KEAP1Q14145 624 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 ZC3H12BQ5HYM0 836 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 KIAA1161Q6NSJ0 714 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 USP51Q70EK9 711 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 SGCDQ92629 289 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 APOOQ9BUR5 198 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 MS4A8Q9BY19 250 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 RBM38Q9H0Z9 239 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 POLR2J3Q9H1A7 115 aaKnown RBP14.97□□□□□ -0.01
RFX1-201ENST00000254325 HSPE1-MOB4S4R3N1 261 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 SOX14O95416 240 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 C1QCP02747 245 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 ASGR2P07307 311 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 MPIP34949 423 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 CLDN2P57739 230 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 RAB30Q15771 203 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 OR52E1Q8NGJ3 308 aa14.97□□□□□ -0.01
RFX1-201ENST00000254325 HMGB4Q8WW32 186 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms