RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HTR4Q13639 388 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 IRF3Q14653 427 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 SPATC1Q76KD6 591 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 NLGN4XQ8N0W4 816 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 MAL2Q969L2 176 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 LRIG1Q96JA1 1093 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 DUSP26Q9BV47 211 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 MKLN1Q9UL63 735 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 AP1M2Q9Y6Q5 423 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 PNMA8CA0A1B0GUJ8 204 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 OR2AG2A6NM03 316 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 SNX4O95219 450 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 DNTTP04053 509 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 ZNF30P17039 623 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 GABRB1P18505 474 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
FOXA1-201ENST00000250448 COPZ1P61923 177 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 OLR1P78380 273 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 SPANXN2Q5MJ10 180 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 DEPDC4Q8N2C3 294 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 NUAK2Q9H093 628 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 SLC6A17Q9H1V8 727 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 PRO3102Q9H379 93 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 RLIMQ9NVW2 624 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 EHD3Q9NZN3 535 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 NDUFAF4Q9P032 175 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 BTBD3Q9Y2F9 522 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 KRT87PA6NCN2 255 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 CCNKO75909 580 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 HSMCR30P0CW71 290 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 ADRB3P13945 408 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 C21orf58P58505 322 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 CYP4F2P78329 520 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 HSPA14Q0VDF9 509 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 ST3GAL4Q11206 333 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 CNTN1Q12860 1018 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 AGAP6Q5VW22 663 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 ZNF367Q7RTV3 350 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 IL17RDQ8NFM7 739 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 CRELD1Q96HD1 420 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 AGAP4Q96P64 663 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 FBXL12Q9NXK8 326 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 CORO2BQ9UQ03 480 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 RUVBL1Q9Y265 456 aaKnown RBP16.22■□□□□ 0.19
FOXA1-201ENST00000250448 VCANP13611 3396 aa16.22■□□□□ 0.19
FOXA1-201ENST00000250448 C1orf226A1L170 272 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 LOC110117498-PIK3R3F6TDL0 507 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 SCAMP2O15127 329 aaKnown RBP16.21■□□□□ 0.19
FOXA1-201ENST00000250448 ANXA8P13928 327 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 PPIBP23284 216 aaKnown RBP16.21■□□□□ 0.19
FOXA1-201ENST00000250448 ITGB7P26010 798 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 SOX6P35712 828 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 CRISP3P54108 245 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 GAB1Q13480 694 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 SLX4IPQ5VYV7 408 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 CCDC190Q86UF4 302 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 DENND6BQ8NEG7 585 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 OR4C15Q8NGM1 316 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 UTP15Q8TED0 518 aaKnown RBP16.21■□□□□ 0.19
FOXA1-201ENST00000250448 ASB11Q8WXH4 323 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 PIK3R3Q92569 461 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 AP2M1Q96CW1 435 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 MAGEB10Q96LZ2 347 aaPredicted RBP16.21■□□□□ 0.19
FOXA1-201ENST00000250448 DUSP12Q9UNI6 340 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 KLK4Q9Y5K2 254 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 K7EQS6 105 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 TNFRSF1BP20333 461 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 PIK3CBP42338 1070 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 SPIBQ01892 262 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 RGNQ15493 299 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 KIAA1211LQ6NV74 962 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 DENND4AQ7Z401 1863 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 TECPR1Q7Z6L1 1165 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 LGI4Q8N135 537 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 TMIEQ8NEW7 156 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 P2RY13Q9BPV8 354 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 CCM2Q9BSQ5 444 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 ATG10Q9H0Y0 220 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 DYRK4Q9NR20 520 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 VPS29Q9UBQ0 182 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 SERGEFQ9UGK8 458 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 BTNL2Q9UIR0 455 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 COL6A3P12111 3177 aa16.21■□□□□ 0.19
FOXA1-201ENST00000250448 C2CD4DB7Z1M9 353 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 M0R129 80 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 MID1O15344 667 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ZW10O43264 779 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 SSX4O60224 188 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 KIAA0513O60268 411 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 GCM2O75603 506 aaPredicted RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 OPN1SWP03999 348 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 KRT8P05787 483 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ASGR2P07307 311 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ENPP1P22413 925 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 P2RY2P41231 377 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 ACSM2AQ08AH3 577 aa16.2■□□□□ 0.18
FOXA1-201ENST00000250448 DDX39BQ13838 428 aaKnown RBP16.2■□□□□ 0.18
FOXA1-201ENST00000250448 SF1Q15637 639 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms