RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 NTRK2Q16620 822 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 ZCCHC12Q6PEW1 402 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 TMIGD1Q6UXZ0 262 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 DUS3LQ96G46 650 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 MRM3Q9HC36 420 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 SEC14L4Q9UDX3 406 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 CLEC2DQ9UHP7 191 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 MGAT4BQ9UQ53 548 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 FAM25EA8MYX2 175 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 SLC19A1P41440 591 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 NFKB2Q00653 900 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 OC90Q02509 493 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 TAF1AQ15573 450 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 VMACQ2NL98 169 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 IFI44LQ53G44 452 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 RTP2Q5QGT7 225 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 IL20RBQ6UXL0 311 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 HJURPQ8NCD3 748 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 FUZQ9BT04 418 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 MAGEH1Q9H213 219 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 ZFR2Q9UPR6 939 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 PCM1Q15154 2024 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 CLDN11O75508 207 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 SYPP08247 313 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 SLC6A4P31645 630 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 SYTL3Q4VX76 610 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 METTL2BQ6P1Q9 378 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 C9orf43Q8TAL5 461 aaPredicted RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 AP2M1Q96CW1 435 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 L3HYPDHQ96EM0 354 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF304Q9HCX3 659 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 OR6C2Q9NZP2 312 aa12.76□□□□□ -0.37
CCDC117-201ENST00000249064 TOR1AO14656 332 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 CLDN9O95484 217 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 IFNW1P05000 195 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 DGKAP23743 735 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PSMD8P48556 350 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 CTBP2P56545 445 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 STX4Q12846 297 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 CLLU1OSQ5K130 101 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 SLC25A25Q6KCM7 469 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF782Q6ZMW2 699 aaPredicted RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PDZD3Q86UT5 571 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PTRH1Q86Y79 214 aaKnown RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 C2orf73Q8N5S3 287 aaPredicted RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 SLC9A6Q92581 669 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ELMOD3Q96FG2 381 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 OR2A14Q96R47 310 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ARL6Q9H0F7 186 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF69Q9UC07 566 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ENOPH1Q9UHY7 261 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 LSM7Q9UK45 103 aaKnown RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 TBC1D24Q9ULP9 559 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 H7C4K7 107 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PAPSS2O95340 614 aaPredicted RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 FGF4P08620 206 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 NUDT7P0C024 238 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 RD3LP0DJH9 198 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ACPPP15309 386 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 SLC11A1P49279 550 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 KIAA1024LP59773 190 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 MORN1Q5T089 497 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 Q6ZSR9 355 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 TMCO2Q7Z6W1 182 aaPredicted RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 UFD1Q92890 307 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 MYO19Q96H55 970 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 TSSK6Q9BXA6 273 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 DERL2Q9GZP9 239 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 URB1O60287 2271 aaKnown RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 MTHFD2P13995 350 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 RAB3BP20337 219 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 LHCGRP22888 699 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 GRK5P34947 590 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 HTR7P34969 479 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 CRYZQ08257 329 aaKnown RBP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 SMARCD3Q6STE5 483 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF367Q7RTV3 350 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 RNF175Q8N4F7 328 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 SYT14Q8NB59 555 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 ZNF680Q8NEM1 530 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC117-201ENST00000249064 FBXW5Q969U6 566 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 NELL2Q99435 816 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 POFUT2Q9Y2G5 429 aa12.75□□□□□ -0.37
CCDC117-201ENST00000249064 TEX13CA0A0J9YWL9 993 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms