RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CD36P16671 472 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 GABRB1P18505 474 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 HMGA2P52926 109 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 NUDT6P53370 316 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 OCA2Q04671 838 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 ATP1A4Q13733 1029 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 ARHGAP19Q14CB8 494 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 MLIPQ5VWP3 458 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 TMEM236Q5W0B7 351 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 SAXO2Q658L1 398 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 TNFAIP8L2Q6P589 184 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 PSRC1Q6PGN9 363 aaPredicted RBP18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 DSG4Q86SJ6 1040 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 PHOSPHO2Q8TCD6 241 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 HERVK_113Q902F9 699 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 GGHQ92820 318 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 RAB7BQ96AH8 199 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 VMP1Q96GC9 406 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 BTBD2Q9BX70 525 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 PELI2Q9HAT8 420 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 FKBP14Q9NWM8 211 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 ENPP4Q9Y6X5 453 aa18.6■□□□□ 0.57
CDC42EP1-201ENST00000249014 M0R129 80 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 B4GALT2O60909 372 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 NADKO95544 446 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 LIPAP38571 399 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 REEP3Q6NUK4 255 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 UTP15Q8TED0 518 aaKnown RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 CHPT1Q8WUD6 406 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 SLC38A5Q8WUX1 472 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 GTPBP3Q969Y2 492 aaKnown RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 NEURL3Q96EH8 262 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 MBNL1Q9NR56 388 aaKnown RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.59■□□□□ 0.577e-8■■■□□ 16.5
CDC42EP1-201ENST00000249014 B3GNT3Q9Y2A9 372 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 ATG2AQ2TAZ0 1938 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 A8MVJ9 347 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 CAPN5O15484 640 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 GADD45GO95257 159 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 BCHEP06276 602 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 CCR8P51685 355 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 MANFP55145 182 aaKnown RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 REEP5Q00765 189 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 SYT16Q17RD7 645 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 EGFLAMQ63HQ2 1017 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 FBXO46Q6PJ61 603 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 LINC01555Q8NAE3 123 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 APOBEC4Q8WW27 367 aaKnown RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 UCN3Q969E3 161 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 LGALS12Q96DT0 336 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 ITPAQ9BY32 194 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 GPR83Q9NYM4 423 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 SPATA7Q9P0W8 599 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 THAP10Q9P2Z0 257 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 PRKAG2Q9UGJ0 569 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 PNMA8BQ9ULN7 279 aaPredicted RBP18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 WDR37Q9Y2I8 494 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 HCN4Q9Y3Q4 1203 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 OR1A2Q9Y585 309 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 SNX11Q9Y5W9 270 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 UNC80Q8N2C7 3258 aa18.59■□□□□ 0.57
CDC42EP1-201ENST00000249014 CLCA1A8K7I4 914 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 M0R082 166 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 FFAR1O14842 300 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 TMPRSS11DO60235 418 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 OCM2P0CE71 109 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 OCMP0CE72 109 aaPredicted RBP18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 CLCNKAP51800 687 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 LIM2P55344 173 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 HSPB3Q12988 150 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 ZNF846Q147U1 533 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 ZNF554Q86TJ5 538 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 AMER3Q8N944 861 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 OR5P2Q8WZ92 322 aa18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 SIRT3Q9NTG7 399 aaPredicted RBP18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 FAM32AQ9Y421 112 aaKnown RBP18.58■□□□□ 0.57
CDC42EP1-201ENST00000249014 CLDN24A6NM45 220 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 FAM227AF5H4B4 570 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 MID1O15344 667 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 PDPK1O15530 556 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 PCDH8O95206 1070 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 CDK1P06493 297 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 RHCEP18577 417 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 CBLP22681 906 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 FCARP24071 287 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 WASP42768 502 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 PCBP4P57723 403 aaKnown RBP18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 DGUOKQ16854 277 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 AGBL4Q5VU57 503 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 GET4Q7L5D6 327 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLC44A2Q8IWA5 706 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 NLGN4XQ8N0W4 816 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 PHF10Q8WUB8 498 aaKnown RBP18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 RAB8BQ92930 207 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 CHFRQ96EP1 664 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 ZNF556Q9HAH1 456 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 PRDM8Q9NQV8 689 aa18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 TEX10Q9NXF1 929 aaPredicted RBP18.58■□□□□ 0.56
CDC42EP1-201ENST00000249014 LCMT2O60294 686 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms