RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 NUP214P35658 2090 aaPredicted RBP18.64■□□□□ 0.57
HOXA6-201ENST00000222728 MGAQ8IWI9 3026 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 CYR61O00622 381 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 PCDH7O60245 1069 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 SEC22BO75396 215 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 RSL1D1O76021 490 aaKnown RBP18.63■□□□□ 0.57
HOXA6-201ENST00000222728 MAOAP21397 527 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 IL10P22301 178 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 JAK1P23458 1154 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 MAPK12P53778 367 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 MC1RQ01726 317 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 RHAGQ02094 409 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 TUBB8Q3ZCM7 444 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 GALNTL6Q49A17 601 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 SPIN4Q56A73 249 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 XKR7Q5GH72 579 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 RNF165Q6ZSG1 346 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 LANCL3Q6ZV70 420 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 UCN3Q969E3 161 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 C8orf44Q96CB5 159 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 LRTM1Q9HBL6 345 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 SEMA3GQ9NS98 782 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 TEX10Q9NXF1 929 aaPredicted RBP18.63■□□□□ 0.57
HOXA6-201ENST00000222728 POLR3HQ9Y535 204 aaPredicted RBP18.63■□□□□ 0.57
HOXA6-201ENST00000222728 CFAP47Q6ZTR5 3102 aa18.63■□□□□ 0.57
HOXA6-201ENST00000222728 TNRC6AQ8NDV7 1962 aaKnown RBP18.62■□□□□ 0.57
HOXA6-201ENST00000222728 CNTRLQ7Z7A1 2325 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 MYOCOSA0A1B0GUC4 107 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 A0A1W2PR48 441 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 GLOD5A6NK44 160 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 LSM1O15116 133 aaKnown RBP18.62■□□□□ 0.57
HOXA6-201ENST00000222728 ALOX12BO75342 701 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 AIFM1O95831 613 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 MMP11P24347 488 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 TIA1P31483 386 aaKnown RBP eCLIP18.62■□□□□ 0.57
HOXA6-201ENST00000222728 TNFRSF17Q02223 184 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 ATP1A4Q13733 1029 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 FAM47EQ6ZV65 393 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 CLNKQ7Z7G1 428 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 RAB43Q86YS6 212 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 MMP21Q8N119 569 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 ADAMTS18Q8TE60 1221 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 C19orf60Q96EN9 201 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 MAGEB18Q96M61 343 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 PTCHD1Q96NR3 888 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 NUF2Q9BZD4 464 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 NECTIN3Q9NQS3 549 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 PRTFDC1Q9NRG1 225 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 C1orf109Q9NX04 203 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 PHF11Q9UIL8 331 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 MCM8Q9UJA3 840 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 HS3ST3B1Q9Y662 390 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 SPACA6W5XKT8 324 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 LOC400499M0QZD8 3231 aa18.62■□□□□ 0.57
HOXA6-201ENST00000222728 GNG14A0A1W2PPG7 69 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 WASHC1A8K0Z3 465 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 TGFBR3LH3BV60 316 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 MASP2O00187 686 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 SOCS6O14544 535 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 PROM1O43490 865 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 PRMT3O60678 531 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 PEX11AO75192 247 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 PRPH2P23942 346 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 RPL38P63173 70 aaKnown RBP18.61■□□□□ 0.57
HOXA6-201ENST00000222728 ID2Q02363 134 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 EEF1A2Q05639 463 aaKnown RBP18.61■□□□□ 0.57
HOXA6-201ENST00000222728 SLC13A2Q13183 592 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 COL28A1Q2UY09 1125 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 DEFB109BQ30KR1 87 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 MRGPREQ86SM8 312 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 TM4SF18Q96CE8 201 aa18.61■□□□□ 0.57
HOXA6-201ENST00000222728 C11orf24Q96F05 449 aaPredicted RBP18.61■□□□□ 0.57
HOXA6-201ENST00000222728 MRPS33Q9Y291 106 aaKnown RBP18.61■□□□□ 0.57
HOXA6-201ENST00000222728 IGHV3-20A0A0C4DH32 117 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 LDB3O75112 727 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 IGHEP01854 428 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 ANXA4P09525 319 aaPredicted RBP18.6■□□□□ 0.57
HOXA6-201ENST00000222728 C8orf89P0DMQ9 161 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 NR2F6P10588 404 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 KIAA0040Q15053 153 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 NSDHLQ15738 373 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 RFTN2Q52LD8 501 aaPredicted RBP18.6■□□□□ 0.57
HOXA6-201ENST00000222728 NOXRED1Q6NXP6 359 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 KIRREL2Q6UWL6 708 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 QSOX2Q6ZRP7 698 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 CRLF3Q8IUI8 442 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 WDR75Q8IWA0 830 aaKnown RBP18.6■□□□□ 0.57
HOXA6-201ENST00000222728 OR4N5Q8IXE1 308 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 ZNF595Q8IYB9 648 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 AMER2Q8N7J2 671 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 PLPP5Q8NEB5 264 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 CDC26Q8NHZ8 85 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 FAM76AQ8TAV0 307 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 METTL21AQ8WXB1 218 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 TUBGCP3Q96CW5 907 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 RPF2Q9H7B2 306 aaKnown RBP18.6■□□□□ 0.57
HOXA6-201ENST00000222728 PRDM9Q9NQV7 894 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 P4HTMQ9NXG6 502 aa18.6■□□□□ 0.57
HOXA6-201ENST00000222728 MS4A12Q9NXJ0 267 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms