RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Gpatch4Q3TFK5 415 aaKnown RBP7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gm2016Q3TQZ4 144 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Arid5aQ3U108 590 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Lsg1Q3UM18 644 aaKnown RBP7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gm8332Q3UTA4 144 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 WhammQ571B6 793 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Afap1l2Q5DTU0 825 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Slc39a12Q5FWH7 689 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ccdc92bQ5SUE3 299 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Pabpn1lQ5XFR0 273 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr140Q60878 302 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Prtn3Q61096 254 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Eif2s1Q6ZWX6 315 aaKnown RBP7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Far2Q7TNT2 515 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Rpp38Q80UU2 280 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Kcng4Q80XM3 506 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ubp1Q811S7 540 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Trim14Q8BVW3 440 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gm5662Q8BX20 144 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Vmn1r22Q8R2D1 302 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 FggQ8VCM7 436 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Evi2bQ8VD58 444 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr665Q8VG79 316 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr1090Q8VGA6 313 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Imp4Q8VHZ7 291 aaKnown RBP7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Aipl1Q924K1 328 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Cpt1bQ924X2 772 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Mrps17Q9CQE3 120 aaKnown RBP7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Mcm8Q9CWV1 833 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Tmem126bQ9D1R1 230 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ccdc103Q9D9P2 237 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Phyhd1Q9DB26 291 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Slc30a7Q9JKN1 378 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ap1m2Q9WVP1 423 aa7.3□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Samt3A2ARK7 233 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr1049A2ARZ0 308 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Pgm2A2CEK3 580 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Wdr25E9Q349 535 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Vmn2r10K7N621 847 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Smr2O09133 150 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 PdynO35417 248 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Pdk4O70571 412 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ap2a1P17426 977 aaKnown RBP7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Atxn10P28658 475 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Mc3rP33033 323 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Cdh4P39038 913 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Fgf1P61148 155 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Rps4xP62702 263 aaKnown RBP7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Dusp2Q05922 318 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Pitpnm3Q3UHE1 974 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Nkx6-3Q3UHX8 262 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gpd1lQ3ULJ0 351 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 McuQ3UMR5 350 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Fcho2Q3UQN2 809 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Foxred2Q3USW5 665 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Q5SPV6 233 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gpr65Q61038 337 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Spag7Q7TNE3 227 aaKnown RBP7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr1152Q7TR34 310 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr1036Q7TR85 310 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Cpped1Q8BFS6 312 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Mettl21cQ8BLU2 248 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Mettl2Q8BMK1 389 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Tmtc3Q8BRH0 920 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Clec9aQ8BRU4 238 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Banf2Q8BVR0 90 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Gk5Q8BX05 534 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Tbc1d17Q8BYH7 645 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Epc1Q8C9X6 813 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Flywch1Q8CI03 673 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Arfip2Q8K221 341 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 TdhQ8K3F7 373 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Crtc3Q91X84 619 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 TfQ921I1 697 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Tspan1Q99J59 240 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 St7Q99M96 577 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Sytl1Q99N80 567 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 ArpinQ9D0A3 226 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Polr3hQ9D2C6 204 aaKnown RBP7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 S100pbpQ9D5K4 396 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Iqcf1Q9D9K8 182 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Lrrc51Q9DAK8 192 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Efcab9Q9DAM2 216 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Plscr2Q9DCW2 307 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Rp2Q9EPK2 347 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Chst1Q9EQC0 411 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Cpn1Q9JJN5 457 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Slc6a14Q9JMA9 638 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Esm1Q9QYY7 184 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Nme3Q9WV85 169 aa7.29□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ankrd12G5E893 2041 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Abca13Q5SSE9 5034 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Dync2h1Q45VK7 4306 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr1164A2AVT5 326 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Zfp780bE9Q2S6 806 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Olfr891E9Q843 316 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Ifi206G3UZV2 921 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 HgdO09173 445 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 Capn6O35646 641 aa7.28□□□□□ -1.24
Scn8a-202ENSMUST00000096198 CrymO54983 313 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms