RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Fads2Q9Z0R9 444 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zfp383A0A087WRR7 490 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rpl7a-ps3A0A140T8L1 270 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Xlr5bA2BI50 236 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tmem215A7E1Z1 235 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm8127E9Q0P0 100 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 4930579F01RikE9Q3L6 325 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 A430033K04RikE9Q8G5 680 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm8094K7N6U8 211 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rps13P62301 151 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rps26P62855 115 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cpt1aP97742 773 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 InhaQ04997 366 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Prrg3Q6PAQ9 231 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ugt2a2Q6PDD0 528 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Oog2Q7TPX8 476 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ldoc1Q7TPY9 151 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 IpmkQ7TT16 396 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Znf32Q80V23 272 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 AardQ811W1 167 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Lrrtm2Q8BGA3 515 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 SynbQ8BI41 618 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rgs7bpQ8BQP9 257 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Peli2Q8BST6 419 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 NclnQ8VCM8 563 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mrpl9Q99N94 265 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mzt2Q9CQ25 159 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 MtapQ9CQ65 283 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Snx7Q9CY18 387 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 RtcAQ9D7H3 366 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 TescQ9JKL5 214 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ubqln2Q9QZM0 638 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ptges3Q9R0Q7 160 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Frem2Q6NVD0 3160 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm29106A0A087WSP8 697 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tex28B1AYN9 409 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cyr61P18406 379 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Hoxd10P28359 340 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fkbp14P59024 211 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ruvbl1P60122 456 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Myadml2Q08AU7 307 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 B4galnt2Q09199 510 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tex10Q3URQ0 928 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Hepacam2Q4VAH7 463 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc25a51Q5HZI9 298 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Thoc7Q7TMY4 204 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1318Q7TQW6 320 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mta1Q8K4B0 715 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rnf130Q8VEM1 419 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1461Q8VEV7 312 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1317Q8VF84 316 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr850Q8VFF2 315 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Impa2Q91UZ5 290 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Nkd1Q99MH6 471 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fam96aQ9DCL2 160 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 PrepQ9QUR6 710 aa11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Khdrbs3Q9R226 346 aaKnown RBP11.1□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Igkv17-121A0A0G2JFA8 117 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Kctd14A0A0U1RNG7 287 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 A0A286YCD0 109 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zfp40B1B1D3 796 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 BC035947B2RQY6 695 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zfp995E9Q6M3 437 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn2r4K7N784 913 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm8926L7MUE8 181 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Aup1P70295 410 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Sec1P97353 368 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Alg10bQ3UGP8 474 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tmem199Q5SYH2 208 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Clec4a4Q5YIR8 236 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tgm4Q8BZH1 670 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Fbxl3Q8C4V4 428 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 FkrpQ8CG64 494 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Slc5a11Q8K0E3 673 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Klhl25Q8R2P1 589 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Rbm12Q8R4X3 992 aaKnown RBP11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Med17Q8VCD5 649 aaKnown RBP11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn1r9A2RST7 299 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 IghmP01872 454 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Lire1P11260 357 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Atp1b2P14231 290 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 TstP52196 297 aaKnown RBP11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cdc42P60766 191 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Gm5460Q3UQ97 254 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Krt76Q3UV17 594 aaKnown RBP11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Mon1bQ8BMQ8 553 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 CptpQ8BS40 216 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Nlrp10Q8CCN1 673 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn1r185Q8R299 319 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Tmem150aQ91WN2 271 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cyp4f13Q99N19 523 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Cib4Q9D9N5 185 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dusp6Q9DBB1 381 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Dgat1Q9Z2A7 498 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Vmn1r10W4VSP8 311 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Scn8aQ9WTU3 1978 aa11.09□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Olfr1306A2BFL7 312 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm13285B1AYI3 182 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm13275B1AYI8 182 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm11239E9Q5Z9 360 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms