RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 EHD3Q9NZN3 535 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 VAPAQ9P0L0 249 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PCDHGB4Q9UN71 923 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 BTBD3Q9Y2F9 522 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PCDHB14Q9Y5E9 798 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MDC1Q14676 2089 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PATE3B3GLJ2 98 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 C4orf51C9J302 202 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ACOT8O14734 319 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 P2RX6O15547 441 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SIGLEC6O43699 453 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 KIF1CO43896 1103 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PCDHGA12O60330 932 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FKBP6O75344 327 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 EPN2O95208 641 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZBTB11O95625 1053 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 CPSF4O95639 269 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 EIF2S1P05198 315 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZCCHC18P0CG32 403 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SMIM10L1P0DMW3 83 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 HOXB9P17482 250 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ALOX12P18054 663 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TCN1P20061 433 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 CERS1P27544 350 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PTPN6P29350 595 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ALDH9A1P49189 494 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 GSK3BP49841 420 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 GFERP55789 205 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 VSX2P58304 361 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MTPNP58546 118 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MS4A2Q01362 244 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 CCNIQ14094 377 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SNCBQ16143 134 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 AMZ1Q400G9 498 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF385BQ569K4 471 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 NDUFAF5Q5TEU4 345 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 NKAIN2Q5VXU1 208 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TMEM214Q6NUQ4 689 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 WDR74Q6RFH5 385 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZNF621Q6ZSS3 439 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MSRB3Q8IXL7 192 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 AMER3Q8N944 861 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 Q8N9G6 341 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FAM156AQ8NDB6 213 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ZCCHC10Q8TBK6 192 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 MIEF2Q96C03 454 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SMIM10Q96HG1 83 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SERINC2Q96SA4 455 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 KCTD14Q9BQ13 255 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ECSITQ9BQ95 431 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TRIM15Q9C019 465 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ALG2Q9H553 416 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 DCLRE1BQ9H816 532 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PDE7BQ9NP56 450 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 DNAAF2Q9NVR5 837 aaKnown RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TAS2R7Q9NYW3 318 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 RAB23Q9ULC3 237 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 VPS4AQ9UN37 437 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PLCL2Q9UPR0 1127 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ASB4Q9Y574 426 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 PCDHGA5Q9Y5G8 931 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 SLC22A7Q9Y694 548 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
CBWD3-219ENST00000622817 TMEM131Q92545 1883 aa6.64□□□□□ -1.35
CBWD3-219ENST00000622817 A0A1W2PR48 441 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 A0A1W2PRB8 838 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 EVPLLA8MZ36 301 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 PDPK1O15530 556 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 B4GAT1O43505 415 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 B3GALT2O43825 422 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 SH3BP5O60239 455 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 PSMG1O95456 288 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 B3GALT4O96024 378 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 C9P02748 559 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 GSNP06396 782 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 PPIBP23284 216 aaKnown RBP6.63□□□□□ -1.35
CBWD3-219ENST00000622817 HTR1EP28566 365 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 CD1CP29017 333 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 MSX2P35548 267 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-219ENST00000622817 CDKN2CP42773 168 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 ARL4DP49703 201 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 SQSTM1Q13501 440 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 SELPLGQ14242 412 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 CCDC6Q16204 474 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 LPAL2Q16609 132 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 GTDC1Q4AE62 458 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 AASDHQ4L235 1098 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-219ENST00000622817 DEFB134Q4QY38 66 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 AAGABQ6PD74 315 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 SPRED1Q7Z699 444 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 DHFR2Q86XF0 187 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 CLECL1Q8IZS7 167 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 MMP21Q8N119 569 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 TRIML2Q8N7C3 387 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 TNIP2Q8NFZ5 429 aa6.63□□□□□ -1.35
CBWD3-219ENST00000622817 OR4A15Q8NGL6 344 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms