RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 C3P1Q6ZMU1 363 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CDHR3Q6ZTQ4 885 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TLK2Q86UE8 772 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 PEX5LQ8IYB4 626 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 RYBPQ8N488 228 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TCEANCQ8N8B7 351 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 SETD6Q8TBK2 473 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TUBGCP3Q96CW5 907 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 NEDD4LQ96PU5 975 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 BTBD9Q96Q07 612 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 NDNQ99608 321 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 RHOXF2Q9BQY4 288 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CHCHD5Q9BSY4 110 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TBCDQ9BTW9 1192 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 ACPTQ9BZG2 426 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 RWDD1Q9H446 243 aaPredicted RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CLSTN2Q9H4D0 955 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TBC1D13Q9NVG8 400 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CHCHD3Q9NX63 227 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 HACD3Q9P035 362 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 PTBP2Q9UKA9 531 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 AURKCQ9UQB9 309 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 NOSIPQ9Y314 301 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 FER1L5A0AVI2 2057 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 IGHV3-20A0A0C4DH32 117 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 IGHV3-38A0A0C4DH36 116 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 GPR89AB7ZAQ6 455 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 SLC1A7O00341 560 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 PHOX2AO14813 284 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 PHF1O43189 567 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 GALR3O60755 368 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 BCAS2O75934 225 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ADCY5O95622 1261 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 IGKV3-15P01624 115 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 MELTFP08582 738 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 GPR89BP0CG08 455 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 MYBL1P10243 752 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 SKILP12757 684 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 F3P13726 295 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 GP9P14770 177 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 AADACP22760 399 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 SOX6P35712 828 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ARF5P84085 180 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 BEX3Q00994 111 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 RBPJQ06330 500 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 CETN1Q12798 172 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 CAMK2DQ13557 499 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF146Q15072 292 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 CRY2Q49AN0 593 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 LACTB2Q53H82 288 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 EIPR1Q53HC9 387 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 C12orf60Q5U649 245 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 SUSD4Q5VX71 490 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 KRT39Q6A163 491 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 RBPMS2Q6ZRY4 209 aaKnown RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 MSANTD1Q6ZTZ1 278 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 CPEB2Q7Z5Q1 589 aaKnown RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 OR6C4Q8NGE1 309 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 OR56B2PQ8NGI1 322 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 OR4D10Q8NGI6 311 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 RNF139Q8WU17 664 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 SLC5A11Q8WWX8 675 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 MR1Q95460 341 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 FER1L6-AS2Q96M78 137 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 C1orf147Q96MC9 270 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 RBM14Q96PK6 669 aaKnown RBP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ANKRD2Q9GZV1 360 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ACTL8Q9H568 366 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 YY1AP1Q9H869 796 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 TRPV5Q9NQA5 729 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 AATFQ9NY61 560 aaKnown RBP eCLIP3.42□□□□□ -1.86
BRCA1-229ENST00000621897 APPL1Q9UKG1 709 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 RALGAPA1Q6GYQ0 2036 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 MROH5Q6ZUA9 1318 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 ATRXP46100 2492 aa3.42□□□□□ -1.86
BRCA1-229ENST00000621897 KDRP35968 1356 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ARPC4-TTLL3A0A0A6YYG9 625 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 A0A1W2PNU3 283 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 L7N2F9 121 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 KIF2AO00139 706 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 POLR3GO15318 223 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 CYTIPO60759 359 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SLITRK3O94933 977 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 HSPA5P11021 654 aaKnown RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 PDGFRAP16234 1089 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 EDNRAP25101 427 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 DUTP33316 252 aaKnown RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 CETN2P41208 172 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ATXN3P54252 364 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ACTR1AP61163 376 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SCN1BQ07699 218 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ILF2Q12905 390 aaKnown RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 MXD4Q14582 209 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 PTGISQ16647 500 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 RNF212Q495C1 297 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 BOLA3Q53S33 107 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 GBP6Q6ZN66 633 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms