RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 C11orf24Q96F05 449 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-217ENST00000621474 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 SERPINI1Q99574 410 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TRIM55Q9BYV6 548 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 COPS7BQ9H9Q2 264 aaPredicted RBP13.48□□□□□ -0.25
CBWD3-217ENST00000621474 P4HTMQ9NXG6 502 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 PTGDR2Q9Y5Y4 395 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 IGSF10Q6WRI0 2623 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
CBWD3-217ENST00000621474 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 IGKV3D-11A0A0A0MRZ8 115 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 TGFBR3LH3BV60 316 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
CBWD3-217ENST00000621474 DNAJB5O75953 348 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 GBAP04062 536 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 ITGB2P05107 769 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 HEXBP07686 556 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 UROSP10746 265 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 RNH1P13489 461 aaKnown RBP13.47□□□□□ -0.25
CBWD3-217ENST00000621474 HSD3B1P14060 373 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 IL10P22301 178 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 HSD3B2P26439 372 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
CBWD3-217ENST00000621474 SERPINB5P36952 375 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 RAP1GDS1P52306 607 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 EMP2P54851 167 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
CBWD3-217ENST00000621474 HMGCS1Q01581 520 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 ZNF33BQ06732 778 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 CSTF3Q12996 717 aaKnown RBP13.47□□□□□ -0.25
CBWD3-217ENST00000621474 CHAF1BQ13112 559 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 AP5B1Q2VPB7 878 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 UGT3A2Q3SY77 523 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 KANK2Q63ZY3 851 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 FAAH2Q6GMR7 532 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 RAB43Q86YS6 212 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 FAM47BQ8NA70 645 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 TSLPQ969D9 159 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 ROGDIQ9GZN7 287 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 LYRM4Q9HD34 91 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 MAN2B2Q9Y2E5 1009 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 CCL27Q9Y4X3 112 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 DNAJC15Q9Y5T4 150 aa13.47□□□□□ -0.25
CBWD3-217ENST00000621474 B4GALT2O60909 372 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 ALOX12BO75342 701 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 SERPINE1P05121 402 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 FGF4P08620 206 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 COX6A1P12074 109 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 BGNP21810 368 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 SLAMF1Q13291 335 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 TUBB8Q3ZCM7 444 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 BORAQ6PGQ7 559 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 COMMD6Q7Z4G1 85 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 TRIM46Q7Z4K8 759 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 NUDT13Q86X67 352 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
CBWD3-217ENST00000621474 PLPP5Q8NEB5 264 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 MGARPQ8TDB4 240 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 SORT1Q99523 831 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 CENPKQ9BS16 269 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 VPS29Q9UBQ0 182 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 ATG4BQ9Y4P1 393 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 ASB4Q9Y574 426 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 CHD6Q8TD26 2715 aa13.46□□□□□ -0.25
CBWD3-217ENST00000621474 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
CBWD3-217ENST00000621474 ARGFXA6NJG6 315 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 AZIN1O14977 448 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 IGHEP01854 428 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 CYC1P08574 325 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 C8orf89P0DMQ9 161 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 MAOAP21397 527 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 JAK1P23458 1154 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 PCOLCEQ15113 449 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 SH2D4BQ5SQS7 431 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 MFSD4BQ5TF39 518 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 C18orf63Q68DL7 685 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.26
CBWD3-217ENST00000621474 AGR3Q8TD06 166 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 CHTF18Q8WVB6 975 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 APIPQ96GX9 242 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 IP6K3Q96PC2 410 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 WDR77Q9BQA1 342 aaPredicted RBP13.46□□□□□ -0.26
CBWD3-217ENST00000621474 ING2Q9H160 280 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 PRM3Q9NNZ6 103 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 NECTIN3Q9NQS3 549 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 FBXL4Q9UKA2 621 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 FBXW2Q9UKT8 454 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 FIS1Q9Y3D6 152 aa13.46□□□□□ -0.26
CBWD3-217ENST00000621474 FAM208BQ5VWN6 2430 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 IGHV1-45A0A0A0MS14 117 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 PRKRAO75569 313 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 KLK1P06870 262 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 ABCE1P61221 599 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms