RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 DAPP1Q9UN19 280 aa13.82□□□□□ -0.2
PRKN-211ENST00000615065 PPIEQ9UNP9 301 aaKnown RBP13.82□□□□□ -0.2
PRKN-211ENST00000615065 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
PRKN-211ENST00000615065 KLF2Q9Y5W3 355 aaPredicted RBP13.82□□□□□ -0.2
PRKN-211ENST00000615065 CYR61O00622 381 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 PRKNO60260 465 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 ITGA10O75578 1167 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 S100BP04271 92 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 ESRRAP11474 423 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 TFEBP19484 476 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 CASQ1P31415 396 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 HPDP32754 393 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 RFC3P40938 356 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 MAGEA4P43358 317 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 MEOX1P50221 254 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 GPR143P51810 404 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 IRF8Q02556 426 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 CHIT1Q13231 466 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 ZNF793Q6ZN11 406 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 BNC2Q6ZN30 1099 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 NCCRP1Q6ZVX7 275 aaPredicted RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 RAPH1Q70E73 1250 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 LRRC70Q7Z2Q7 622 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 CHERPQ8IWX8 916 aaKnown RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 SRRM1Q8IYB3 904 aaKnown RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 GHDCQ8N2G8 530 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 FBF1Q8TES7 1133 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 PHACTR1Q9C0D0 580 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 ADAP2Q9NPF8 381 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 PRDM7Q9NQW5 492 aa13.81□□□□□ -0.2
PRKN-211ENST00000615065 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
PRKN-211ENST00000615065 CACNA1CQ13936 2221 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 EML6Q6ZMW3 1958 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 SUPT3HB4E1H0 165 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 UBXN8O00124 270 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 RTCAO00442 366 aaKnown RBP13.8□□□□□ -0.2
PRKN-211ENST00000615065 SH3BGRLO75368 114 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 SUPT3HO75486 399 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 ABOP16442 354 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 HTR1EP28566 365 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 STX2P32856 288 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 PTGER1P34995 402 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 MSH2P43246 934 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 CAV1Q03135 178 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 TBCCQ15814 346 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 C16orf47Q6ZP98 133 aaPredicted RBP13.8□□□□□ -0.2
PRKN-211ENST00000615065 FGD2Q7Z6J4 655 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 UBE3DQ7Z6J8 389 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 ISCA2Q86U28 154 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 SULF2Q8IWU5 870 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 CYP4Z2PQ8N1L4 340 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 TMEM156Q8N614 296 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 SREK1Q8WXA9 508 aaKnown RBP13.8□□□□□ -0.2
PRKN-211ENST00000615065 ATOH8Q96SQ7 321 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 CCDC77Q9BR77 488 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 RAB17Q9H0T7 212 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 LIN28AQ9H9Z2 209 aaKnown RBP13.8□□□□□ -0.2
PRKN-211ENST00000615065 IGSF5Q9NSI5 407 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 NUDT4Q9NZJ9 180 aa13.8□□□□□ -0.2
PRKN-211ENST00000615065 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
PRKN-211ENST00000615065 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-211ENST00000615065 APCP25054 2843 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 TMEM200CA6NKL6 621 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 KERAO60938 352 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 IFNA16P05015 189 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 PCNAP12004 261 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 CASP2P42575 452 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 GPR85P60893 370 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 TGM3Q08188 693 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 E2F2Q14209 437 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 CDSNQ15517 529 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 ELAVL1Q15717 326 aaKnown RBP13.79□□□□□ -0.2
PRKN-211ENST00000615065 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
PRKN-211ENST00000615065 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
PRKN-211ENST00000615065 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 XKRXQ6PP77 449 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 MDGA2Q7Z553 956 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 TBC1D1Q86TI0 1168 aaPredicted RBP13.79□□□□□ -0.2
PRKN-211ENST00000615065 MCEMP1Q8IX19 187 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 AGAP11Q8TF27 550 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 ZNF473Q8WTR7 871 aaKnown RBP13.79□□□□□ -0.2
PRKN-211ENST00000615065 UBTD2Q8WUN7 234 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 KCNC2Q96PR1 638 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 MAPKAP1Q9BPZ7 522 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 NMRAL1Q9HBL8 299 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 KCMF1Q9P0J7 381 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 MEMO1Q9Y316 297 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 ABCA12Q86UK0 2595 aa13.79□□□□□ -0.2
PRKN-211ENST00000615065 ESYT3A0FGR9 886 aa13.78□□□□□ -0.2
PRKN-211ENST00000615065 KLRC4-KLRK1H3BQV0 150 aa13.78□□□□□ -0.2
PRKN-211ENST00000615065 K7EPI3 171 aa13.78□□□□□ -0.2
PRKN-211ENST00000615065 TFECO14948 347 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms